Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score = 62.4 bits (150), Expect = 9e-14
 Identities = 101/449 (22%), Positives = 170/449 (37%), Gaps = 68/449 (15%)

Query: 291 NEAFRPVYE--TASFTTAWDIIWHLNDLFTFENNLVYADFSYDRYTNPNSRGDFNTDGKE 348
           NE +   Y+  T+S++    ++ +    F +   LVYA+ + D   N +   +   D K+
Sbjct: 425 NEMYVTQYDSDTSSWSQELRLLSNYGGDFNWMVGLVYAEDNLDDLRNCSFAANVYADWKQ 484

Query: 349 FHIEPLLRYI--------------ALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRT 394
           F     + Y               A+  +++T +  RY Q  +D  Y+     +  DG  
Sbjct: 485 FPGCGTMAYTQDTEVISGYAQLTYAISDTLSTTVDLRYTQEKKD--YV--GDVFVNDGTW 540

Query: 395 KAKSVFAEVTYALTPSINVN------LAGRFEREQVKRNVSHPRYKLDYDETSSVFLPKL 448
              +     T   +P+   N      + GR++    + N SH      YDE+   +   L
Sbjct: 541 ICTANGLNTTDPDSPTYCANFIGWDPVTGRYDL--ARGNKSH------YDESDPSWKVNL 592

Query: 449 DVAYTPVQGQTYGIKAAKGYNASGAGLAFNSMQFTGFRPYEFEQESIWNYEFYTRHRFSH 508
           D   TP       + ++        G   N       RPY+ E+ +     F +     +
Sbjct: 593 DWKVTPDTLLYASVGSSFKSGGFFGGFLTNP---NAIRPYKPERNNGVELGFKSTLE-DY 648

Query: 509 SVEVLTNLFY---NDFDSMQMTQTTSSGDVF--IANLDEASTYGAEIGSRWYATSSLELF 563
            V++    FY    DF S       S+G VF  + NL +    GAE+  RW AT   E+ 
Sbjct: 649 RVQINGAAFYYDYRDFQSAIQEVDQSTGGVFNGLRNLGDVIMQGAELDLRWMATEDFEIR 708

Query: 564 ANLGLLKTEFKETT-------GNT-----------KELPRAPKMSANVGLLYDFGQGFEF 605
           A +GLL TE  + T       G T            EL  APK S N+   Y +    E 
Sbjct: 709 AAIGLLDTEVDKVTKFESADVGITNIFGEVIDIQGNELNNAPKFSGNLIARYHYQLSAEL 768

Query: 606 SS----NAAYTGSYFSESGNSEKFAIDSYWVAN--AQLAYVFEHGRATLYATNLLDSD-K 658
                 +A++   Y+    N   +    Y + N  A++    ++    ++  NL D   +
Sbjct: 769 EGFIQLDASFKDDYWLSVSNEPIYREKGYTLVNMRAEIFSPADNWSVAVWGRNLTDKTYR 828

Query: 659 TTLYLSTNNTLDQLKQQPRMIGASVQLNF 687
            + YL   ++       PR  G S+  N+
Sbjct: 829 NSFYLDGLDSGYSEYNAPRTFGVSLSYNY 857



 Score = 49.7 bits (117), Expect = 6e-10
 Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 22/239 (9%)

Query: 4   LCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQE----MPVLVVIGEKT 59
           L  +R +V+ +   KL  L+  + G  +G     E Q     +++      V+ V  +K 
Sbjct: 11  LLRSRAAVSRSN-MKLSCLAMAVFGAISGQVFAEEAQAPEEAKEQKASAFEVIEVTAQKR 69

Query: 60  QRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNL-VDSGQSNNMP--TIRGIDGSG 116
            + + +   ++  F  D +E   GA +   L + IPN+ V     + +P   IRG+    
Sbjct: 70  VQRMQDVGIAISAFKADELEDL-GAYQASALAEFIPNMEVAVSDDSGIPIFVIRGV---- 124

Query: 117 PSVGGLASF-AGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTS 175
               GL  +    +P   + +D     Y    +   +++D  +VE+  GPQ  + GRN++
Sbjct: 125 ----GLQDYNTNNTPNTAVVVDDVYQPYG--IYSAFAMFDTDRVEVLKGPQGGLYGRNST 178

Query: 176 AGAIVMKSNDP-THHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSF 233
            GAI   S  P     E+ V    G  +        S P + +  A RL+   +  D +
Sbjct: 179 GGAISFSSKRPELETTEANVAVDYGNYNSLNIRAGASLP-LGEVAAVRLAVQSETSDGY 236