Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  145 bits (365), Expect = 8e-39
 Identities = 163/672 (24%), Positives = 283/672 (42%), Gaps = 83/672 (12%)

Query: 41  NTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDS 100
           +T     EM V+VV  +  Q S+ +  +S+ V DQ  IE   GA   +D+L  I N   S
Sbjct: 27  DTPPANDEMEVIVVTSDFRQSSLDKMPSSISVIDQQQIE-DEGAQHFEDVLNGIANFNWS 85

Query: 101 GQSNNMP--TIRGIDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQ 158
           G S+      IRG+       G   S  G    +   ID   L          S++D+QQ
Sbjct: 86  GGSSRAKYFQIRGVGEQEEYQGAPNSSVGY---IIDDIDMSGLGMIS------SMYDLQQ 136

Query: 159 VEIYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQD- 217
           VE+  GPQ    G N  AG I +KSNDPT  FE   +  +G+ +    +G  S P+    
Sbjct: 137 VEVLRGPQGTRYGANALAGLIYLKSNDPTSVFEHGAELQLGDDNLRTYSGFSSGPLTDSG 196

Query: 218 ELAFRLSFDQQKRDSFVDLAAFEPAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSH-- 275
           +L +R+S  Q +++ + D       G       +   G++     A D     L+L H  
Sbjct: 197 KLLYRVSLQQHEQNGYRDNLYL---GRDDTNGRDEFTGRIKLRWYATDDLVADLSLMHAD 253

Query: 276 ---------MDSRGPQTENINVAGNEAFRPVYETASFTTAWDIIWHLNDLFTFENNLVYA 326
                    +D+ G  T   +  G +  R    +   T +    + L  L +   +  + 
Sbjct: 254 FNNGYDAWTLDNNGFDTLT-DEPGVDKQRTTGGSLKLTYSGADSFELVSLSSMAQSDTHH 312

Query: 327 DFSYDRYTNP-------------------NSRGDFNTDGKEFHIEPLLRYIALDGSVNTL 367
            +  D + NP                   N  GD  T  +EF +         DGS + L
Sbjct: 313 GYDGD-WANPEFWAARSCEGEPCQYDYTWNKLGDRTTLSQEFRLSSTEAGRIFDGSTDWL 371

Query: 368 IGARYYQSSQDDMYIDAASAYPMDGRTKAK------SVFAEVTYALTPSINVNLAGRFER 421
           +G    + ++D+  ++  + +  + R  A+      +VFA++   L     +++  R ER
Sbjct: 372 VGVYGLRLTEDNDTLEIYNGW--EDRLLAEYEATNLAVFAQLDSDLGNGYALSVGARLER 429

Query: 422 EQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSMQ 481
            +   + S    K  +D + +++   + ++ T   GQ    + A+GY A G  +   S+ 
Sbjct: 430 RESDYSDSD---KDAFDPSENMWGGHIALSKTLSPGQQAYARIARGYKAGGFNM---SLP 483

Query: 482 FTGFRPYEFEQESIWNYEFYTRHRF-SHSVEVLTNLFYNDFDSMQMTQTTSSGD------ 534
            +     EF+ E+++NYE   +  +         +LFY D    Q++ +  + D      
Sbjct: 484 VSLSDKKEFQAETLYNYELGLKSEWLDGDATTHFSLFYMDRRDQQVSASQQNPDEPQKFI 543

Query: 535 VFIANLDEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGNTK----------ELP 584
           +++ N   +  YGAE+ + WYAT +L+L+  LG L+T + +     K          EL 
Sbjct: 544 LYVENAGSSHNYGAELEANWYATDNLKLYGTLGWLETAYGDYAYQDKYGGLVDLTGRELA 603

Query: 585 RAPKMSANVGLLYDFGQG-FEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEH 643
            +P ++ + G  Y    G F   + +  +  Y+S+S +S+    + Y + NA++ Y  E 
Sbjct: 604 HSPNLTYSAGATYRSDLGWFANLTTSGKSEFYYSDSNDSKS---EPYTIFNARVGYETET 660

Query: 644 GRATLYATNLLD 655
             A L+  NL D
Sbjct: 661 WSAYLWGRNLFD 672