Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 685 a.a., ferric vibriobactin receptor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  286 bits (731), Expect = 3e-81
 Identities = 203/700 (29%), Positives = 335/700 (47%), Gaps = 45/700 (6%)

Query: 15  KKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFD 74
           K FK  T++A++  L   S AYA     S++  E   + V GEK +RS+ +T++S+ V D
Sbjct: 4   KAFKKSTIAAIVSSLLISS-AYAAADAESSEPIER--ITVYGEKIERSLKDTTSSISVID 60

Query: 75  QDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNM 134
           ++T++ +         L  +PN+V    S ++P IRG+ G+G + G  +   G   R++ 
Sbjct: 61  KETLD-SGQYQSTSSALSEVPNVVVL--SGSVPDIRGVSGNGSASGFNSFTGGARARVST 117

Query: 135 SIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAV 194
            +DG +  +     G   LWD+QQ+E++ GPQS I GRN+  G + +K+ DPT  ++ A 
Sbjct: 118 LVDGVAEPFVADLSGDTGLWDIQQIEVFRGPQSTINGRNSIGGTVFIKTEDPTFDWQGAA 177

Query: 195 KAGIGESD-YSQTAGMISAPIIQDELAFRLSFDQQKRDSF---VDLAAFEPAGDPKKIEM 250
           + G  + D +  +A M+S PI+ DELAFR+S      +++   ++        D  ++  
Sbjct: 178 RVGYRDQDNFIDSAVMLSGPILDDELAFRVSGQNVTGETYNKGLEYPTNPATFDQNELIT 237

Query: 251 NSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNE-AFRPVY----ETASFTT 305
           N  RGK L++PSA++  K   +LS+ D +G    N     +  A++P++    ET S T 
Sbjct: 238 NRWRGKFLWQPSAIEDLKVLYSLSYNDEKGDSGRNYFTGDDPWAYKPIFQRYIETKSTTH 297

Query: 306 AWDIIWHLNDLFTFENNLVYADF-----SYDRYTNPNSRGDFNTDGKEFHIEPLLRYIAL 360
           +  + + L +   F+  + Y D+     SY+         D     K + ++    +   
Sbjct: 298 SVKVDYELGEGQAFDLIVAYMDYNWGFESYEALATAQQYVDMK--DKSYTVDGKYSFGLK 355

Query: 361 DGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFE 420
           D   N  +G  Y++ SQ D     +S Y  D  TK+ SV+ EVTY L  S+ + + GR  
Sbjct: 356 DKDFNGFVGLAYFKRSQ-DFGSTGSSIYSGDDSTKSASVYGEVTYGLADSLWITVGGRVM 414

Query: 421 REQVKRNVS----HPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLA 476
           RE+  RN +      +     D+ ++V LPKL + Y      T      +GYN+ G  L+
Sbjct: 415 REEQLRNFTMLYQGSQLLEKLDDANTVTLPKLVLQYALNDNTTLAASVRRGYNSGGGALS 474

Query: 477 FNSMQFTGFRPYEFEQESIWNYEFYTRHRFSH-SVEVLTNLFYNDFDSMQMTQTTSSGDV 535
               ++     Y +++E +  YE  +R  F++  V +  NLFYNDFD  Q + +      
Sbjct: 475 LVESEY-----YYYDEEFVNTYELSSRSAFANGDVNLSANLFYNDFDGYQASNSARK--- 526

Query: 536 FIANLDEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGN-----TKELPRAPKMS 590
            I N+D+A +YG E       T + +  + +GLL +E K+   +       +L  AP ++
Sbjct: 527 -ITNIDKAVSYGVEAEFSAMLTENWQFISGVGLLDSEIKQADPSYGDIIGNQLNSAPHVT 585

Query: 591 ANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYA 650
           AN GL Y     F F     Y G YF++  N+E      Y VA   L Y  +  R + + 
Sbjct: 586 ANAGLKYWLSDAFSFGFAGHYVGEYFADINNTESRVAGDYVVARVSLDYQTDSWRVSGFV 645

Query: 651 TNLLDSDKTTLYLSTNNTLDQ---LKQQPRMIGASVQLNF 687
            NL D    T+    + +          PR IG S    F
Sbjct: 646 NNLFDEQAMTVNEPASRSYPDGYAAIIDPRNIGVSAMYRF 685