Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 55.5 bits (132), Expect = 1e-11
 Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 27/238 (11%)

Query: 55  IGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMP---TIRG 111
           +  K+  S+ ET A+V V DQ+ I    G   + DL++ I  +  +G +  +     IRG
Sbjct: 56  LATKSDMSLMETPAAVVVVDQELIS-AQGVDNLQDLIRNISGVTQAGNNYGIGDNLVIRG 114

Query: 112 IDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQG 171
           + G+  +  G+   AG     N +               RSL +++ VE+  GP + + G
Sbjct: 115 L-GANYTFDGMYGGAGLGNTFNPT---------------RSLTNVESVEVLKGPATGLYG 158

Query: 172 RNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRD 231
             ++ G I +    P    +  +   +G+ D + +  + S   I D++A+RL     + +
Sbjct: 159 MGSAGGVINLIEKKPQFESKHKITTEVGQWD-TYSLAIDSTGGITDDVAYRLVAKTARSE 217

Query: 232 SFVDLAA--FEPAGDPKKIEMNS----VRGKLLYEPSALDGFKTTLTLSHMDSRGPQT 283
            + DL A   E  G  K +  +S    + G  + +  A+D     + + + DS G +T
Sbjct: 218 GYRDLGADRDEVFGSLKWVLSDSQDVMLSGAYIKDAIAVDSIGHPIRIYNADSVGGKT 275