Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., TonB-dependent siderophore receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 68.2 bits (165), Expect = 1e-15
 Identities = 143/630 (22%), Positives = 245/630 (38%), Gaps = 70/630 (11%)

Query: 52  LVVIGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRG 111
           +VVIG ++ ++    +A+V V D   IE++ GAT + ++L+        GQS    +   
Sbjct: 39  IVVIG-RSDKTPLNIAANVNVIDAAAIEQS-GATSLTEVLR--------GQSGIQLSDNN 88

Query: 112 IDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFG-----PRSLWDMQQVEIYLGPQ 166
           I G+  ++ G ++ +  +  L + +DGR L   +IA       P +L  +++VEI  G  
Sbjct: 89  I-GTSFAMRGFSASSAVNNTLIL-LDGRRLNNIDIAAPSLNAIPLNL--IERVEILSGSA 144

Query: 167 SYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFD 226
             + G     G I + +  P +   S   +G G  +  +  G +S  I +D   F L+  
Sbjct: 145 GVLYGDQAVGGVINIVTKSPENTGGSVQLSG-GSFNTYEGRGDVSGAINKDWHYF-LTGS 202

Query: 227 QQKRDSFVDLAAFEPAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQT--- 283
             + D++    A E           S+ G++ Y+ +A D F    +    D   P     
Sbjct: 203 YNQGDNYRKHNANETG---------SILGRIQYK-TATDSFFVETSYYDDDRENPGALTP 252

Query: 284 ----ENINVAGNEAFRPVYETASFTTAWDIIWH-LNDLFTFENNLVYADFSYDRYTNPNS 338
               EN   + N +    Y     T A     H LN  +    +L Y+D           
Sbjct: 253 KQFKENPRQSSNSS---EYVHEMTTAARSGYQHQLNQNWALAADLDYSDTLVSSLNW--G 307

Query: 339 RGDFNTDGK-EFHIEPLLRYIALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAK 397
            G  NT     F  + L  Y    G +N + G    +   +   +  ++   M      +
Sbjct: 308 AGSHNTRSLLMFSPKALANYSTRQGELNLVTGLDISRGKAEFDSMARSNVQEM------Q 361

Query: 398 SVFAEVTYALTPSINVNLAGRFER---EQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTP 454
           S + + T  L+ +++  + GR+ R   + V  NV      LD D T+  F     + Y P
Sbjct: 362 SAYLQATVPLSHTLSYVVGGRYARVTDDLVDGNVYPNGIDLDEDATAFEF----GLNYRP 417

Query: 455 VQGQTYGIKAAKGYN-ASGAGLAFNSMQFTGFRPYEFEQ-ESIWNYEFYTRHRFSHSVEV 512
                + ++  + +  A     A+      G +P      E+ W++        S S+ V
Sbjct: 418 SAEHRFYLRGDENFRFAKVDEQAYTPKDVYGLKPQTGRSYEAGWDWTVA-----SQSLRV 472

Query: 513 -LTNLFYND---FDSMQMTQTTSSGDVFIANLDEASTYGAEIGSRWYATSSLELFANLGL 568
            L  L   D   FD         S      N D +  YGA     W  T +L L      
Sbjct: 473 SLYRLDLEDEIVFDPSAEKPVGGSFQGANVNADASRRYGASADWDWQVTQALTLGLEYNY 532

Query: 569 LKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEK-FAI 627
           +  EF +   + K+L    + +    +  DF + F+  + A YTG  F E  N+ +   +
Sbjct: 533 IDAEFTDGVNDGKQLSWVAEHTGRGYVSMDFAEHFQVFAEAIYTGDRFIEGDNANQGDKL 592

Query: 628 DSYWVANAQLAYVFEHGRATLYATNLLDSD 657
            SY + N  L Y  +   A+L   NL D +
Sbjct: 593 SSYVLGNLALNYTRDAWLASLRIDNLFDKE 622