Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 823 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 56.6 bits (135), Expect = 5e-12
 Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 27/238 (11%)

Query: 55  IGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMP---TIRG 111
           +  K+  S+ ET A+V + DQ+ I  + G   + DL++ I  +  +G +  +     IRG
Sbjct: 56  LATKSDMSLMETPAAVVIVDQELIN-SQGVDNLQDLIRNISGVTQAGNNYGIGDNLVIRG 114

Query: 112 IDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQG 171
           + G+  +  G+   AG     N +               RSL +++ VE+  GP + + G
Sbjct: 115 L-GANYTYDGMYGGAGLGNTFNPT---------------RSLTNVESVEVLKGPATGLYG 158

Query: 172 RNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRD 231
             ++ G I +    P    +  +   +G+ D + +  + S   I D+LA+RL     + +
Sbjct: 159 MGSAGGVINLIEKKPQFESKHKITTEVGQWD-TYSLAIDSTGGITDDLAYRLVAKTARSE 217

Query: 232 SFVDLAA--FEPAGDPKKIEMNS----VRGKLLYEPSALDGFKTTLTLSHMDSRGPQT 283
            + DL A   E  G  K +  +S    + G  + +  A+D     + + + DS G +T
Sbjct: 218 GYRDLGADRDEVFGSLKWVLSDSQDLMLSGAYIKDAIAVDSIGHPIRIYNADSVGGKT 275