Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 738 a.a., TonB-dependent siderophore receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 62.4 bits (150), Expect = 8e-14
 Identities = 146/683 (21%), Positives = 241/683 (35%), Gaps = 110/683 (16%)

Query: 55  IGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDG 114
           IG KT  ++ E   SV+V  +  I+    A  I DL + I  + +   S           
Sbjct: 78  IGTKTAINVMELPQSVQVLTEQLID-DQAARNITDLYRSIAGVSEFSYSG---------- 126

Query: 115 SGPSVGGLASFAGTSPRLNMSIDG-RSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRN 173
                    +F G     N+  DG R   YS   F    L+++Q+VE+  GP S + G  
Sbjct: 127 --------VTFRGFRDDANVFYDGVRGDPYS--GFSVPQLFNVQRVEVLKGPASALYGGG 176

Query: 174 TSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMIS-APIIQDELAFRLSFDQQKRDS 232
              G I   +  PT  F    +  +    Y    G +     + ++LA+RL    Q+ DS
Sbjct: 177 EPGGMINYVTKKPT--FVERKELTLSTGSYDMMGGSLDFTGGLTEDLAYRLGGYYQQEDS 234

Query: 233 FVDLAAFEPAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINV--AG 290
           F + A      D    E   V G LLYE S      TT  L   D  G +   + V  AG
Sbjct: 235 FRNNA------DSLNAE---VAGGLLYEISDDTKLTTTFDLIRQDLGGNRLRGVPVDDAG 285

Query: 291 NEAFRPVY---ETASFTTAWDII------WHLNDLFTFENNLVYADFSYDRYTNPNSRG- 340
           N    P Y   E + F     ++         +D F+ +  + Y +   D+  +  SRG 
Sbjct: 286 NFLVDPSYNANEKSDFQKMDALVLQAILDHQFSDDFSVKTQIRYLNNESDQQYH-ESRGW 344

Query: 341 -DFNTDGK----------EFHIEP------------LLRYIALDGSVNTLIGARYYQSSQ 377
            D N DGK          E+ ++             + R+ AL      L G  Y+    
Sbjct: 345 VDVNGDGKANSADGTIKREYRVQSRANDEISLTNDFVYRFNALGFEHEFLFGGDYHYVET 404

Query: 378 DDMYIDAASAYPMDGRTKAKSVFAEV---TYAL----TPSINVNLAGRFEREQVKRN--- 427
           +  Y  A S   +      +  + E    TY L    T     N  G + +E +  N   
Sbjct: 405 EYHYKLATSKEGVGNLYIFELNYGETNPSTYQLKDMDTDGTRSNRFGLYLQEHLHFNEQW 464

Query: 428 --VSHPRYKL--DYDE------TSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAF 477
             ++  R+    DYD+      + +   P+  + Y P++  ++ +  ++ +N +      
Sbjct: 465 SLIAGLRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIESMSFYLNYSESFNPASLSDQE 524

Query: 478 NSMQFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFI 537
           +        P    Q  +     +   +F  ++ +      N   +  +      G   +
Sbjct: 525 SIKSDGALDPETGNQIELGMKNEWLDGQFMTTLALYRIEKQNVAQANPLDTGDDDGIPNL 584

Query: 538 ANLDEASTYGAEIGSRWYATSSLELFANL---------GLLKTEFKETTGNTKELPRAPK 588
            NL E  + G E       T +L + AN          G++      T G+ K    AP+
Sbjct: 585 VNLGEVRSQGVEWTLVGDLTDNLTVTANYAYNDTQVIKGVINDSLTNTFGDGKHFANAPR 644

Query: 589 MSANVGLLYDFGQGFE--FSSNAAYTGSYFSESGNSEK--FAIDSYWVANAQLAYVFEHG 644
             A +   YD  Q  +   +    Y G  FS +G + K     D  W         ++  
Sbjct: 645 HQAGLWTRYDI-QAIDSAIAFGMDYVGEQFSLNGQTVKPHTVFDMSWTTQ------WDQT 697

Query: 645 RATLYATNLLDSDKTTLYLSTNN 667
           +  L   N+ D +      S  N
Sbjct: 698 QVRLNLKNIFDKEYAVSGFSERN 720