Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (328), Expect = 2e-34
 Identities = 176/747 (23%), Positives = 305/747 (40%), Gaps = 106/747 (14%)

Query: 24  AMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIERTPG 83
           A+   L T ++A  +  +      +M ++VV  +    S+ +  +S+ V D   I+    
Sbjct: 33  AISAALSTAAWAQTDAIDKPEPSNDMEIMVVTADFRSASLEKMPSSITVIDAQQIQ-DES 91

Query: 84  ATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNMSIDGRSLTY 143
           A   +D++  I N   SG S+  P    I G    VG    + G +P  ++      +  
Sbjct: 92  AQHFEDVMSSIANFNWSGGSSR-PKYFQIRG----VGEQEQYQG-APNSSVGYIIDDIDL 145

Query: 144 SEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDY 203
           S I     S++D+QQVE+  GPQ    G N  AG I +KSNDPT  FE   +  +G  D 
Sbjct: 146 SGIGM-VSSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSNDPTDVFEHGAEVSLGNDDL 204

Query: 204 SQTAGMISAPIIQD-ELAFRLSFDQQKRDSFVDLAAFEPAGDPKKIEMNSVRGKLLYEPS 262
              +G  S P+    +L +R+S  Q +++ + D           + E    R KL +  S
Sbjct: 205 QTFSGFSSGPLTDSGKLLYRVSLQQHQQNGYRDNLYLNKEDTNGRDEFTG-RAKLRWYAS 263

Query: 263 ALDGFKTTLTLSHMD----------SRGPQTENINVAGNEAFRPVYETASFTTAWDIIWH 312
             D  +  LTL H D          +  P+    +  G ++ R        T +    + 
Sbjct: 264 --DNLQLDLTLLHADFDNGYDAWSLTNDPKHTISDQPGVDSQRTTGAGFKATYSGAESFE 321

Query: 313 LNDLFTFENNLVYADFSYD-RYTNPN---------SRGDFNTDGK--------------E 348
           L  L +F N   +  +SYD  + NP             D+N+ GK               
Sbjct: 322 LTSLTSFANTDHH--YSYDGDWANPEYWASKQCDIYDADWNSIGKLPCVYDATWSKVGQR 379

Query: 349 FHIEPLLRYIALDG------SVNTLIGARYYQSSQDDMYIDAASAYPMDG-------RTK 395
                 LR  + D       S + LIG  Y+ S Q+D  +   + Y   G       RTK
Sbjct: 380 KTFTQELRLTSSDAGRIFNESTDWLIGV-YFSSLQEDNSLIDYAKYSNGGLNPSFKERTK 438

Query: 396 -AKSVFAEVTYALTPSINVNLAGRF------EREQVKRNVSHPRYKLDYDETSSVFLPKL 448
              S +    YA+   ++++++  +        E    + S      D+  + +++   L
Sbjct: 439 YLDSTYDAQNYAIFGQLDIDMSNDYLLSLGLRLENRSSDYSDTNLD-DFSPSETMWGGHL 497

Query: 449 DVAYTPVQGQTYGIKAAKGYNASGAGLAFNSMQFTGFRPYEFEQESIWNYEFYTRHRF-S 507
            ++    +     I+ A+GY A G  +   +  F+  +  EF  E+++NYE   +  + S
Sbjct: 498 ALSKALSEQHNAYIRVARGYKAGGFNMTLPA-DFSDKK--EFNTETLYNYELGLKSSWLS 554

Query: 508 HSVEVLTNLFYNDFDSMQMTQTTSSGD------VFIANLDEASTYGAEIGSRWYATSSLE 561
            ++     LFY D    Q++ +  + +      +FI N   +  YG EI + WY  S+  
Sbjct: 555 GALSTNVALFYMDRQDQQVSASQQNPEDLSEFILFIDNAGSSKNYGLEIDANWYIDSNWH 614

Query: 562 LFANLGLLKT------------EFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSN- 608
           L++++G L T            +F + TG  ++L  +P ++ ++G  Y    G+  + N 
Sbjct: 615 LYSSVGYLNTAYGDYQYEVAEDQFVDLTG--RDLAHSPHLTYSLGGTYRANSGWFANVNM 672

Query: 609 AAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYATNLLDSDKTTLYLSTNNT 668
           +  +  Y+S+S +S     + Y + NA+L Y      A L+  NL D +         N 
Sbjct: 673 SGKSEFYYSDSNDSRS---EPYTIVNARLGYEASAWSAYLWGRNLFDEEYGVRGFYFGNE 729

Query: 669 LDQ---LKQ-----QPRMIGASVQLNF 687
            D     KQ      PR IG ++ + F
Sbjct: 730 PDNGWAEKQYIRYGDPRQIGVTLNVKF 756