Pairwise Alignments

Query, 687 a.a., TonB-dependent siderophore receptor from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., TonB-dependent siderophore receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 24/203 (11%)

Query: 65  ETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMP---TIRGIDGSGPSVGG 121
           E   ++ V D+  I+ T G T   DLL    ++        +    ++RG  G+     G
Sbjct: 71  ELPQAITVLDEQLIKDT-GLTRFQDLLDYSASVARQNNGGGLWDSFSLRGFPGNENMPSG 129

Query: 122 LASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIVM 181
                     +N    GR  +      G R L ++  VEI  GP S + GR+   G + +
Sbjct: 130 YL--------INGFNGGRGFS------GHRDLSNVAYVEILKGPGSALYGRSEPGGTVNI 175

Query: 182 KSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFEP 241
            +  P +  +  +KA  G  D  +  G  ++  + D LAFR++   Q+ DSF D    + 
Sbjct: 176 VTKKPQYEAQGYLKASAGSFDQYRLEGDFTSG-LTDSLAFRINGAWQEHDSFRDYVFSD- 233

Query: 242 AGDPKKIEMNSVRGKLLYEPSAL 264
               KKI   S+R +L    S L
Sbjct: 234 ----KKIVTPSLRWQLSDRSSLL 252