Pairwise Alignments
Query, 2413 a.a., non-ribosomal peptide synthetase from Vibrio cholerae E7946 ATCC 55056
Subject, 1381 a.a., Pyoverdine sidechain non-ribosomal peptide synthetase PvdD @ Siderophore biosynthesis non-ribosomal peptide synthetase modules from Pseudomonas fluorescens FW300-N2E2
Score = 222 bits (565), Expect = 4e-61
Identities = 248/1055 (23%), Positives = 444/1055 (42%), Gaps = 106/1055 (10%)
Query: 432 EMMQQSVQQID-AQLGYARRESIQEMPLTPLQQAYLLGRSTQIALGGVAMHEFREYRGHI 490
++ +S ++D A L +A++ E P + AY L R+ +++ G +
Sbjct: 20 DVQTRSGSRLDRAPLSFAQQRLWLEHQRDPTRSAYNLPRALRLS-------------GEL 66
Query: 491 DTQSLHSRLLYLVEHIPALRTRIDQEKW--IQWVSPCIALNWQAIDLQHLSREQALLAVE 548
D ++L L +++ LRT + +Q V L DL L+ + A+
Sbjct: 67 DAEALEQALNRVIDRHDILRTAFNDIDGAPVQVVERDACLVLHREDLGALAPPERATALS 126
Query: 549 PVRQQYQQRMHDLTRSPWQICVVQLPIEEQEEFSSIVLTSFDALIVDGRTHALILA---- 604
+ + + DL+R+P + L ++ E ++L + ++ D ++ +++
Sbjct: 127 QRIKLHAGQPFDLSRAPLMRATL-LRLDSDEH---VLLLNMHHIVSDAWSNTILMQDMTQ 182
Query: 605 ----ALLGSEEPDITQVVQNARDTQSISPQFASKKAQDEA--YWKSKLHPDCPPPALPWK 658
AL+G P + +Q A ++ A + YW L D P LP
Sbjct: 183 AYARALMGDPTPLPSLPMQYADYATRQRGEYLQSMACQHSGEYWSRYLGHDLPTLELPQD 242
Query: 659 QALETITTSRYARESLQIPKESVGKLNRCGIENGLFLNSLLTATILDVLSYWTTEIGMRV 718
T R L + L+ GL + +L ++ + V
Sbjct: 243 FPRATGQQHMAGRVHLSLAPAMARALDTFCQRQGLTPFVVALGAWQMLLGRYSNQDDFTV 302
Query: 719 GFPVLIPSSNAIDGNESSFVILEHEKSTLSLLSQASKLQREM----LEALEHLAFS-GVD 773
G P +S+ FV + ++ + R++ L ALEH + +
Sbjct: 303 GVPNANRNSHESQDLVGFFVSSQVYRTRIDSSRSGQDYLRDLRAQALAALEHADYPLELI 362
Query: 774 LNRLLMNQAPQALVLPVVLTNGLSWKTLNP--------EDAVTLFDGVTQTPQVALDIRL 825
L++L Q P A L VL N W+T +P E A+ D T Q D+ L
Sbjct: 363 LDQL---QRPGAQGLFQVLFN---WRTGSPALPISPRGELALEFLD--TGDSQAKFDLSL 414
Query: 826 TYD-EQKNLIISFDYALAVLETELIREMLSALHHRLSQITSSASLAAPLEPCIDLSHYRF 884
D Q+ ++ +F+Y+ + T+ I M + L A + P +L
Sbjct: 415 DVDYSQQQIVATFEYSRDLYRTDTIERMAEHWQNLLW-----ALIETPERALGELHLLGA 469
Query: 885 NSDESASHDCD----------FLAKLAQQLFVRTEDKTAVICGEQTLSYAQLGEQVQRVM 934
+ + HD + L ++ + T D A+ Q +SYA+L Q +
Sbjct: 470 DEHQQTLHDWNRQPTQLPRERCLHQVIESHAATTGDAIALTFEGQHMSYAELNRQANSLA 529
Query: 935 WQLKARGLTTGNVLAICLPRSVEHIVISLASALSGIIWVPIDAASPKERLNYLLENCHAD 994
+L +G+ ++ I RS + ++ LA+ +G +VP+D A P +RL Y++E+
Sbjct: 530 HRLIEQGVGPDVLVGIAAERSPQMLIGLLATLKAGGAYVPLDPAYPADRLAYMIEDSGVT 589
Query: 995 LVVMDK--------PCEFGNVIAFDALIEPVLFADGVPDVTPLDQLSRLSQSQQTAYYLY 1046
++ P G ++ D++ + + PDV P+ AY +Y
Sbjct: 590 QILTQTHLRESLALPAGIGCLL-LDSVDADSAYPEHNPDV-PI-------HPDNLAYVIY 640
Query: 1047 TSGTTGKPKCVVVNNQATSNVIGQTGQAWHLTSEDVVMSVTPLHHDMSVFDLFATLSFGA 1106
TSG+TGKPK ++ + S + T + +DV D SV+++F L G
Sbjct: 641 TSGSTGKPKGALLAHHNVSRLFQATEHWFSFDHQDVWCLFHSYAFDFSVWEIFGALLHGG 700
Query: 1107 TLVLPAGHEEKDALQWNRLIERHQVTIWVSVPAILEMLL--SCTQAGQL-HSLRLIAQGG 1163
LV+ + ++ L+ + VT+ P+ + LL +C L H LR + GG
Sbjct: 701 RLVIVPHAVSRSPQEFYALLCQENVTVLNQTPSAFKSLLQVACEAHQPLGHRLRQVIFGG 760
Query: 1164 DYIKPATIAQL--RAGSNPPRLISLGGPTETTIWSIWHELTADDV---SVIPYGRPLAGN 1218
+ I ++ R G P+LI++ G TETT+ W L+ DD+ + P G+P+
Sbjct: 761 EAIDVQSLRPWFERFGDQSPQLINMYGITETTVHVTWRPLSIDDLHSETASPIGQPIVDL 820
Query: 1219 RYFIMDEIQRHVPQGVVGRIFTSGVNLAQGYLEDGELKQTDFVTVLDEHGHPVRAFRTGD 1278
++++D VP+G +G ++ LA+GY + +L + F+ + R +RTGD
Sbjct: 821 SWYLLDAHLNPVPKGCIGELYVGRAGLARGYHQRADLTASRFIPDPFDPLPGSRLYRTGD 880
Query: 1279 QGYYRADGNIIFASRINGYVKVRGVRVSLPDIEKQLQTHPALASVVVVDYADTNGDTALA 1338
YR DG+I + R++ VK+RG R+ L +I+ +LQT P + VV+ + G +A
Sbjct: 881 LARYRTDGSIEYIGRLDHQVKIRGFRIELGEIQARLQTLPEVQDCVVLTHDGPTGLQLVA 940
Query: 1339 ALFSVKPQQSASSQALREFAKQSLPSSHIPSRFIALEALPLSANGKVDRKQCQAHVQRQS 1398
+ + +P + + L K LP +PS + ++ PL+ANGK+DRK
Sbjct: 941 YVIATQPPSAELREGLLSALKAQLPDYMVPSHLLFIDRFPLNANGKLDRK---------- 990
Query: 1399 ISVEPVGQPNQSQPLSPPTLSSASLSEFEQRVWRQ 1433
+ EP S ++P T L E ++W+Q
Sbjct: 991 VLPEPDASLRHSNYVAPRT----QLEEALAQLWQQ 1021
Score = 89.0 bits (219), Expect = 5e-21
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 18/347 (5%)
Query: 1948 KAPLSLAQASLWKAMSKYAKFGLTHIFNLPFALKFLDEVNEQAFGEAFHWLLLRHAGLRT 2007
+APLS AQ LW ++ + +NLP AL+ E++ +A +A + ++ RH LRT
Sbjct: 31 RAPLSFAQQRLWL---EHQRDPTRSAYNLPRALRLSGELDAEALEQALNRVIDRHDILRT 87
Query: 2008 HFGLEDGQPYQHVIA-ASNIEHYQWFWT-SKDNAAQSVARLLAQEAEHTFDLSQELPLRL 2065
F DG P Q V A + H + + A ++++ + A FDLS+ +R
Sbjct: 88 AFNDIDGAPVQVVERDACLVLHREDLGALAPPERATALSQRIKLHAGQPFDLSRAPLMRA 147
Query: 2066 NFVRDEQTGTQYLSLLFHHIVLDEWSINILMDELAQVYQHSVQGTRPQWQTEPLPFHEFA 2125
+R + + L L HHIV D WS ILM ++ Q Y ++ G + P+ + ++A
Sbjct: 148 TLLRLD-SDEHVLLLNMHHIVSDAWSNTILMQDMTQAYARALMGDPTPLPSLPMQYADYA 206
Query: 2126 RKQRSSAFNQTHLNYWLTKFAGVPWAQ------PLFAADHPLSNSTGVDLGEGGWVEIKL 2179
+QR +L + +G W++ P +TG G V + L
Sbjct: 207 TRQRGE-----YLQSMACQHSGEYWSRYLGHDLPTLELPQDFPRATG-QQHMAGRVHLSL 260
Query: 2180 PKSTMVSLYQLAKARHASLFNVMYAAISASVHCLGAPEKLLVGTPASGRLDAEFFDTVGY 2239
+ +L + + + F V A + + VG P + R E D VG+
Sbjct: 261 APAMARALDTFCQRQGLTPFVVALGAWQMLLGRYSNQDDFTVGVPNANRNSHESQDLVGF 320
Query: 2240 FTTMGVQLVDFTKVQTVWQLIEQVKNSINQSMPYTDIPIDLIEEGLK 2286
F + V ++ + ++ ++ + D P++LI + L+
Sbjct: 321 FVSSQVYRTRIDSSRSGQDYLRDLRAQALAALEHADYPLELILDQLQ 367
Score = 53.9 bits (128), Expect = 2e-10
Identities = 67/339 (19%), Positives = 128/339 (37%), Gaps = 15/339 (4%)
Query: 8 QAAYWLGRQHDCLLDGVAAHLYAEFDGQALNRQALTEAVRALYAKHPMLRLAITK-DGQQ 66
Q WL Q D G+ L+ +AL +A+ + +H +LR A DG
Sbjct: 38 QQRLWLEHQRDPTRSAYNLPRALRLSGE-LDAEALEQALNRVIDRHDILRTAFNDIDGAP 96
Query: 67 -KILPLSTFHQLKVDDLSQWKPDEVESFVHTKRQRMTHQMLDLTQGNPIEISLTLLPEGK 125
+++ L +DL P E + + + + Q DL++ + +L L +
Sbjct: 97 VQVVERDACLVLHREDLGALAPPERATALSQRIKLHAGQPFDLSRAPLMRATLLRLDSDE 156
Query: 126 HRLHIDADMIACDAQSFRLLVDDLTSLYLEAIEHRLEIIESDVVTFFQYLDAQQADRALA 185
H L ++ I DA S +L+ D+T Y A+ + S + + Y Q+ + +
Sbjct: 157 HVLLLNMHHIVSDAWSNTILMQDMTQAYARALMGDPTPLPSLPMQYADYATRQRGEYLQS 216
Query: 186 KRKEVDKKWWQERLATIPAEPSLPYQPVPTDAVSANSQ-----RFAHWFTPVERKGLAEV 240
+ ++W L LP +P D A Q R P + L
Sbjct: 217 MACQHSGEYWSRYLG-----HDLPTLELPQDFPRATGQQHMAGRVHLSLAPAMARALDTF 271
Query: 241 ARQHHLTLTQLTLALFSQVIANACQERQFRLNVPTFHRGNRSLDIEHTIGDFSNLLIFSA 300
++ LT + L + ++ + F + VP +R S + + +G F + ++
Sbjct: 272 CQRQGLTPFVVALGAWQMLLGRYSNQDDFTVGVPNANR--NSHESQDLVGFFVSSQVYRT 329
Query: 301 DVGTTQTLLSLCQQTANQLHQLLRHESYSGVSVMRDLSR 339
+ ++++ + Q L H Y ++ L R
Sbjct: 330 RIDSSRSGQDYLRDLRAQALAALEHADYPLELILDQLQR 368
Score = 50.8 bits (120), Expect = 2e-09
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 1411 QPLSPPTLSSASLSEFEQRVWRQHQRHGDGRNQY--ATAYRLSGKVNIARLITALSQLPN 1468
Q S L A LS +QR+W +HQR R+ Y A RLSG+++ L AL+++ +
Sbjct: 22 QTRSGSRLDRAPLSFAQQRLWLEHQRDPT-RSAYNLPRALRLSGELDAEALEQALNRVID 80
Query: 1469 HFPVLNRRYVLDEASGLTLYSA-KPTPLEIHFEHV------ESMDEAFEHLVRWQNQPMD 1521
+L R ++ G + + L +H E + E + + QP D
Sbjct: 81 RHDIL--RTAFNDIDGAPVQVVERDACLVLHREDLGALAPPERATALSQRIKLHAGQPFD 138
Query: 1522 LAKQATLSFCLLSLGSEERVLGVISHQIISEQWDWRRVFECVTNGY 1567
L++ + LL L S+E VL + H I+S+ W + + +T Y
Sbjct: 139 LSRAPLMRATLLRLDSDEHVLLLNMHHIVSDAWSNTILMQDMTQAY 184
Score = 44.3 bits (103), Expect = 1e-07
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 1861 VEECILAEFRSALGVAEMTAEDDFFDFGGHSLIATRVIGRLLSEQGIELHINDMFSFPNA 1920
+EE + ++ +L V + D FF+ GGHS++A +I L + I + + ++ + P+
Sbjct: 1011 LEEALAQLWQQSLKVERVGVNDSFFELGGHSILAIELIANLKARLNITVRLQELLAHPSI 1070
Query: 1921 KQLAQ-QAVLHRKPTSTSFAVSEVVESSKAPLSLAQ 1955
+LA + HR+ T +VE + AP S Q
Sbjct: 1071 AELALFISQKHREQTPC------LVELNNAPASAPQ 1100