Pairwise Alignments
Query, 2413 a.a., non-ribosomal peptide synthetase from Vibrio cholerae E7946 ATCC 55056
Subject, 1370 a.a., Amino acid adenylation from Pseudomonas syringae pv. syringae B728a
Score = 226 bits (576), Expect = 2e-62
Identities = 252/969 (26%), Positives = 412/969 (42%), Gaps = 94/969 (9%)
Query: 487 RGHIDTQSLHSRLLYLVEHIPALRTR---IDQEKWIQWVSPCIALNWQAIDLQHLSREQA 543
+G +D +L L L+ LRT +D E Q V P + L +DL+ LS
Sbjct: 101 KGVLDVSALERALNELIMRHEILRTTFASVDGEPR-QIVHPAMPLVMPGVDLRDLSPTAR 159
Query: 544 LLAVEPVRQQYQQRMHDLTRSPW-QICVVQLPIEEQEEFSSIVLTSFDALIVDGRTHALI 602
V +Q + DL P + +++L EE + L S +I DG + +I
Sbjct: 160 EAHVRMAVEQQAKAPFDLASGPLLRASLLRLADEEY-----LWLYSVHHIIADGWSMGVI 214
Query: 603 LAALLGSEEPDITQVVQN-----ARDTQSISPQFAS------KKAQDEA------YWKSK 645
L ++T V + A ++ Q+A ++ DEA +WK
Sbjct: 215 LQ--------EVTTVYGDFLRGQASSLAPLAVQYADYACWQQQRLGDEALAGQLDFWKRT 266
Query: 646 LHPDCPPPALPWKQALETITTSRYARESLQIPKESVGKLNRCGIENGLFLNSLLTATILD 705
L P +P + T+ A S + ++ LN + L ++L +
Sbjct: 267 LADAPPLLDMPADRPRPTVQRYVGATFSSTVDGTTLRALNALARQTQGTLFNVLIGALSV 326
Query: 706 VLSYWTTEIGMRVGFPVLIPSSNAIDGNESSFVILEHEKSTLSLLSQASKLQREMLEALE 765
+L + + + +G P S I+ FV + + L L ++L RE+ L
Sbjct: 327 LLWRHSGQRDLCIGTPFANRSRPEIEPLIGHFVNTQVIRQRLDPLQTFAELLREVRATLL 386
Query: 766 HL-AFSGVDLNRLLMNQAPQALVLPVVLTNGLSWKTLNPEDAVTLFDGVTQTPQ------ 818
+ A V +R++ P L + P +A + G++ TP
Sbjct: 387 DVHAHQDVPFDRVVEAVNPPRDTAYSPLFQVMMVLQNTPGNAARM-PGLSMTPYGTGSAT 445
Query: 819 VALDIRLTYDEQKNLI-ISFDYALAVLETELIREMLSALHHRLSQITSSASLAAPLEPCI 877
D+ + E+ ++ + +Y + + I + L Q+ + I
Sbjct: 446 AKFDLAFEWVERDGVLSLLVEYNTDLFDQTSIERLSGHYRQLLEQVALNPKQPVGALTLI 505
Query: 878 DLSH-----YRFNSDESASHDCDFLAKLAQQLFVRTEDKTAVICGEQTLSYAQLGEQVQR 932
+ + +NS + D + +L + R + + AVI ++LSY+QL Q R
Sbjct: 506 SDAEREQILHAWNSPAPLAQPVDCVHRLIEAQVTRRQAECAVIFEGRSLSYSQLNTQANR 565
Query: 933 VMWQLKARGLTTGNVLAICLPRSVEHIVISLASALSGIIWVPIDAASPKERLNYLLENCH 992
+ L G+ +A+C+ RS+E V LA +G +VP+D P RL ++L++
Sbjct: 566 LAHHLLTLGVGPDVRVAVCIERSLELPVALLAVLKAGGAYVPLDPDYPSGRLRHILDDTS 625
Query: 993 ADLVVMDKP-------------CEFGNVIAFDALIEPVLFADGVPDVTPLDQLSRLSQSQ 1039
+++ P CE V D + VL+A+ P P Q ++ +
Sbjct: 626 PVVLLAQGPTRKILREALEGADCE---VPILDVQADAVLWAE-CPSDNPQTQRVGVN-AD 680
Query: 1040 QTAYYLYTSGTTGKPKCVVVNNQATSNVI-------GQTGQAWHLTSEDVVMSVTPLHHD 1092
AY LYTSGTTG PK +V ++ SN++ G+ G H P D
Sbjct: 681 HLAYVLYTSGTTGLPKGAMVTHRGLSNLLLWCQQFCGECGSMLH---------KIPFGFD 731
Query: 1093 MSVFDLFATLSFGATLVL--PAGHEEKDALQWNRLIERHQVTIWVSVPAILEMLLSCTQA 1150
S +++F L G LV+ P GH E L +++ VT V VPA+L++ L +
Sbjct: 732 ASAWEIFWPLLTGGRLVIARPGGHFEPGYLA--QVVREQSVTAMVFVPAMLQLFLEVEEV 789
Query: 1151 GQLHSLRLIAQGGDYIKPATIAQLRAGSNPPRLISLGGPTETT-IWSIWHELTADDV--S 1207
H+L+ + GG + PA + RL ++ GPTETT I S+W DV
Sbjct: 790 SACHTLKDVFSGGGELSPAVARLFQQRLPHARLHNVYGPTETTVISSVWTLQPGADVPPR 849
Query: 1208 VIPYGRPLAGNRYFIMDEIQRHVPQGVVGRIFTSGVNLAQGYLEDGELKQTDFVTVLDEH 1267
+P GRP+A R++++DE VP GV G++ GV +A+GYL EL F+
Sbjct: 850 QLPIGRPIANTRFYVLDERDAPVPAGVTGQLHIGGVGVARGYLGLDELTAERFIDNPFVA 909
Query: 1268 GHPVRAFRTGDQGYYRADGNIIFASRINGYVKVRGVRVSLPDIEKQLQTHPALASVVVVD 1327
G R +R+GD YR DG + F R + VK+RG+R+ L +IE +L P + + V +
Sbjct: 910 GD--RLYRSGDLARYRPDGQLEFIGRNDFQVKLRGIRLELSEIEARLDLFPGIRTSVALI 967
Query: 1328 YADTNGDTALAALFSVKPQQSASSQALREFAKQSLPSSHIPSRFIALEALPLSANGKVDR 1387
DT + L A ALR +L S+ +PS ++ L+ALPL+ NGKVDR
Sbjct: 968 VGDTAQNQRLVA--CCVTDSPVDESALRAHLATTLSSAVMPSAYLWLDALPLTVNGKVDR 1025
Query: 1388 KQCQAHVQR 1396
A +
Sbjct: 1026 AALAAQADQ 1034
Score = 99.0 bits (245), Expect = 5e-24
Identities = 112/468 (23%), Positives = 192/468 (41%), Gaps = 54/468 (11%)
Query: 1951 LSLAQASLW--KAMSKYAKFGLTHIFNLPFALKFLDEVNEQAFGEAFHWLLLRHAGLRTH 2008
LS +Q LW M F +N+P A+ ++ A A + L++RH LRT
Sbjct: 72 LSFSQRQLWFLDQMEPGNAF-----YNVPTAVLLKGVLDVSALERALNELIMRHEILRTT 126
Query: 2009 FGLEDGQPYQHV-----IAASNIEHYQWFWTSKDNAAQSVARLLAQEAEHTFDLSQELPL 2063
F DG+P Q V + ++ T+++ V + Q+A+ FDL+ L
Sbjct: 127 FASVDGEPRQIVHPAMPLVMPGVDLRDLSPTARE---AHVRMAVEQQAKAPFDLASGPLL 183
Query: 2064 RLNFVRDEQTGTQYLSLL-FHHIVLDEWSINILMDELAQVYQHSVQGTRPQWQTEPLPFH 2122
R + +R +YL L HHI+ D WS+ +++ E+ VY ++G + +
Sbjct: 184 RASLLR--LADEEYLWLYSVHHIIADGWSMGVILQEVTTVYGDFLRGQASSLAPLAVQYA 241
Query: 2123 EFARKQRSSAFNQT---HLNYWLTKFAGVPWAQPLF--AADHPLSNSTGVDLGEGGWVEI 2177
++A Q+ ++ L++W A P PL AD P V G
Sbjct: 242 DYACWQQQRLGDEALAGQLDFWKRTLADAP---PLLDMPADRPRPT---VQRYVGATFSS 295
Query: 2178 KLPKSTMVSLYQLAKARHASLFNVMYAAISASVHCLGAPEKLLVGTPASGRLDAEFFDTV 2237
+ +T+ +L LA+ +LFNV+ A+S + L +GTP + R E +
Sbjct: 296 TVDGTTLRALNALARQTQGTLFNVLIGALSVLLWRHSGQRDLCIGTPFANRSRPEIEPLI 355
Query: 2238 GYFTTMGVQLVDFTKVQTVWQLIEQVKNSINQSMPYTDIPIDLIEEGLKGVEHETEGHMF 2297
G+F V +QT +L+ +V+ ++ + D+P D + E + +F
Sbjct: 356 GHFVNTQVIRQRLDPLQTFAELLREVRATLLDVHAHQDVPFDRVVEAVNPPRDTAYSPLF 415
Query: 2298 EVFIQLHAKNKLHGELLLTEGHAIRFQQVDPDKSESGLG-LQFEILEERIEQKQTLRVMM 2356
+V + L T G+A R + +G +F++ E +E+ L +++
Sbjct: 416 QVMMVLQN----------TPGNAARMPGLSMTPYGTGSATAKFDLAFEWVERDGVLSLLV 465
Query: 2357 SY------------MSKHYSP--AQVALLTKVTSGMFERFSDCIAQDI 2390
Y +S HY QVAL K G SD + I
Sbjct: 466 EYNTDLFDQTSIERLSGHYRQLLEQVALNPKQPVGALTLISDAEREQI 513
Score = 36.6 bits (83), Expect = 3e-05
Identities = 51/215 (23%), Positives = 81/215 (37%), Gaps = 47/215 (21%)
Query: 1419 SSASLSEFEQRVWRQHQRH-GDGRNQYATAYRLSGKVNIARLITALSQLPNHFPVLNRRY 1477
++ +LS ++++W Q G+ TA L G ++++ L AL++L +L +
Sbjct: 68 TAVALSFSQRQLWFLDQMEPGNAFYNVPTAVLLKGVLDVSALERALNELIMRHEILRTTF 127
Query: 1478 VLDEAS--------------GLTLYSAKPTPLEIHFEH-VESMDEAFEHLVRWQNQPMDL 1522
+ G+ L PT E H VE +A P DL
Sbjct: 128 ASVDGEPRQIVHPAMPLVMPGVDLRDLSPTAREAHVRMAVEQQAKA----------PFDL 177
Query: 1523 AKQATLSFCLLSLGSEERVLGVISHQIISEQWDWRRVFECVTNGYNQIACDIDPVMEGED 1582
A L LL L EE + H II++ W + + VT Y + G+
Sbjct: 178 ASGPLLRASLLRLADEEYLWLYSVHHIIADGWSMGVILQEVTTVYGDF-------LRGQA 230
Query: 1583 LSLGFTPVMPQTPLSQALLPWLQPASHATWIEQSL 1617
SL PL+ +Q A +A W +Q L
Sbjct: 231 SSL--------APLA------VQYADYACWQQQRL 251
Score = 33.9 bits (76), Expect = 2e-04
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 1750 VHLQLEGLRCEKLLFAAMHPKFEVALGVGLNCQGALVLELALDATVSPHVGAYLLEQFVA 1809
+ L+L + LF + + VAL VG Q ++ A T SP + L
Sbjct: 943 IRLELSEIEARLDLFPGI--RTSVALIVGDTAQNQRLV--ACCVTDSPVDESALRAHLAT 998
Query: 1810 AIGGRTMPSSTTSSSHVSAIELTSNNPPTSNNAHAALAESELELSAVNSSA----VEECI 1865
+ MPS+ + A+ LT N A AA A+ +L VN + +E +
Sbjct: 999 TLSSAVMPSAYL---WLDALPLTVNGK-VDRAALAAQADQDLADRQVNLGSPRDHIELTL 1054
Query: 1866 LAEFRSALGVAEMTAEDDFFDFGGHSLIATRV---IGRLLSEQGIELHINDMFSFPNAKQ 1922
++ L V ++ D+FF+ GG S+ A ++ IGR S +E+ + + P +
Sbjct: 1055 YQIWKDLLLVPQIGIRDNFFNVGGTSIAAIKMAYEIGRAFS---VEVPVRVILGHPTIEA 1111
Query: 1923 L 1923
L
Sbjct: 1112 L 1112