Pairwise Alignments

Query, 377 a.a., flagellar basal-body protein from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  120 bits (301), Expect = 6e-32
 Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 15/380 (3%)

Query: 8   IISALWMMLQLPSAHAAWYEVTGSAAIVSSEEV-ARLHALEDALYKAVNFAGADIGSISN 66
           + SAL + +Q   A A W    G A IV+     AR  A+E A+  A   AG  I S  +
Sbjct: 9   VFSALLVSIQ---AQADWVTAQGEAVIVNGNITKARAEAIEQAVSYASLQAGVSIESSQH 65

Query: 67  LMPLLESDRREYLFANHEVRYILIEERKAINNVMYVRTRIDIYPSATA-CHVEQYKKTML 125
           ++     D    L        + +   +  NN + V+ R+++  +  + C     K  +L
Sbjct: 66  MVDGHLIDTSTQLMQQLMTGPVQLISEQIENNRLRVQLRVELMEAPQSQCQSTHLKAAIL 125

Query: 126 IGNIDLASPQQAVMGQIYQVGDDFAQVINRRLEQES-RSFVSVGT-TQYDIDPK---APE 180
           +    ++   Q   GQI  +G   +Q + RRL+  S  +F ++    + D+D +   AP 
Sbjct: 126 LPEAAVSHRSQLAQGQINSLGAAVSQQLARRLDSTSGAAFANLRPGARLDLDARQLAAPG 185

Query: 181 -RIK-MIAQDAGAQYIMGGMITDLTATIEQKT---LQDDIINRQFAMEISVFDGKTGNEV 235
            R+   +A  + +QY++   ITD++    Q +   L  D   RQFA+ +++F G +G  +
Sbjct: 186 YRLPGYLAMASDSQYVLVPQITDVSTEPAQSSYFGLITDAPERQFALTLTLFQGISGEII 245

Query: 236 MTRTYREVARWPFPKTSQIDTRSARFWASTYGEMMLRVSRNIMLDLESEISCKITLPQIV 295
               +   A W F +T Q+     RFW S YG  + ++    + +L+  + C+  L QIV
Sbjct: 246 WRDEFNTSAPWEFERTEQVSPAHDRFWRSAYGMAVDKLLVQAIKELDKALLCRPVLGQIV 305

Query: 296 AKFGTTATMDLGRIHGVKQGDKLSLWHTGAFIDQQGLPRNKVTQSEITLTVSRVYEHEAE 355
           A+ G T  ++LGR HG+K GD+L++       D+    R     ++ T++++++ E  A 
Sbjct: 306 ARQGQTLILNLGRRHGIKVGDELAVVLAKHIPDRLNETRATGNNTKTTISITQITEDSAR 365

Query: 356 LTVDQPELAYSIQIGDVMHK 375
             +       +IQ+ D+  K
Sbjct: 366 AELSGLGSVDNIQVSDIAIK 385