Pairwise Alignments

Query, 211 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 89.7 bits (221), Expect = 3e-23
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 15/201 (7%)

Query: 1   MKKWLSLVPVVLLTSCAYAPIYNGKEP-----YNGSQFMLMESPRHTLDFFVESMTEDLM 55
           M+  L +  ++LL  CA        EP      +G+      S  H      + +  +L+
Sbjct: 2   MRNALIISSLLLLGGCA------ANEPATPTLQSGNSLPASSSVMH----LTQQLANELV 51

Query: 56  LSNTSITARTPIAVTSFVDLQNMDTTNWLGNSVSEGFIHQFQRRGFKVVDFKTTGSIQVT 115
             N  +T + P+ V + V L N+ +TN LG  + +G I       F +VD     +++VT
Sbjct: 52  RQNDQLTPKQPLLVATPVLLDNLKSTNALGLQIQQGLIAAMHDHQFNLVDLNVGENVRVT 111

Query: 116 QQGDFAFSRDWKNLSSEQEVQYVLTGTMLRQEGGVIVNARVVGMHSRIVVATAQGFLPAD 175
            QG+   +RDW+ L ++  V++VL  TM  +  GV+VN+R+V + +  VV+ A   +   
Sbjct: 112 DQGELLLTRDWRQLPADLPVEHVLVSTMSLKPDGVVVNSRIVNVTNNRVVSVAAASVSQA 171

Query: 176 RIGRDLDTLNSIRTQDGVLIR 196
            +   L     +  QDG LIR
Sbjct: 172 ELADYLSLSEKVVAQDGKLIR 192