Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Chemotaxis signal transduction protein from Pseudomonas stutzeri RCH2

 Score =  346 bits (888), Expect = e-100
 Identities = 177/303 (58%), Positives = 223/303 (73%), Gaps = 4/303 (1%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M G+LDSVNQRTQLVGQNRLELL FRL G Q YGINVFKV+EVLQCP+LT MP   R+V+
Sbjct: 1   MAGVLDSVNQRTQLVGQNRLELLLFRLEGEQLYGINVFKVREVLQCPRLTIMPKCGRVVR 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVA IRG T+ ++D+SLA G     D+  SF VI E+N     FLVSSVERI+N+ WEAI
Sbjct: 61  GVASIRGTTLPILDLSLATGKSALMDLQNSFAVITEYNNRTLGFLVSSVERIVNLNWEAI 120

Query: 121 LPPPNGTGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEF 180
           LPPP G G+ +YLTAVT+IDN+LVEIIDVEK+LAE+ P +E++ S +   I    + K  
Sbjct: 121 LPPPKGAGRDHYLTAVTHIDNKLVEIIDVEKVLAEVAPTSEEVSSGV---IDADTRAKAL 177

Query: 181 VRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEG-PISNQISLVIS 239
             R+LI DDSSVARKQ+ R +E+IG EVV   DG++A   L  M  EG   + +  ++IS
Sbjct: 178 SCRVLIVDDSSVARKQITRCLENIGIEVVKLNDGREALNYLKRMADEGKKPAEEFLMMIS 237

Query: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELG 299
           DIEMPEMDGYTLT E+R    ++ ++++LH+SLSGVFNQ MV+R GA+ F+AKF PD+L 
Sbjct: 238 DIEMPEMDGYTLTTEVRHDPRMQGMHILLHTSLSGVFNQNMVKRAGADDFLAKFQPDDLA 297

Query: 300 NAV 302
             V
Sbjct: 298 ARV 300