Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., Chemotaxis signal transduction protein from Pseudomonas stutzeri RCH2

 Score =  309 bits (791), Expect = 6e-89
 Identities = 154/308 (50%), Positives = 220/308 (71%), Gaps = 6/308 (1%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M GILDSV+QRT+LVGQNRLE+L FRL GRQ++ INVFKV+EV+Q PK+T MP+ H  V 
Sbjct: 1   MAGILDSVDQRTRLVGQNRLEILMFRLGGRQKFAINVFKVQEVVQLPKMTLMPHRHSSVC 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GV ++RGQT+ V+D+S A+G RP    ++S +++ E+NRT+QAFLV  V+RI+N+ WEA+
Sbjct: 61  GVVNLRGQTLPVVDLSRAIGLRPLVPDERSTIIVTEYNRTVQAFLVGGVDRIVNLNWEAV 120

Query: 121 LPPPNGTGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSI-GEQIAQVEQEKE 179
           +PPP   G+ +YLT++T +D+ELVE+IDVEK+LAEI P     D+SI  E++A    E+ 
Sbjct: 121 MPPPTTAGRQHYLTSITKVDDELVEVIDVEKVLAEIVP----YDTSISAERLADPILERA 176

Query: 180 FVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGPI-SNQISLVI 238
             R +L  DDSSVA  Q++  +  +G ++ T  DG      L      G + ++++ +V 
Sbjct: 177 RGREVLCVDDSSVALSQLRETLSQLGLKIHTASDGLKGLNMLKAWADAGEVLTDKLLMVF 236

Query: 239 SDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDEL 298
           +D EMPEMDGY LT EIR    L+DLYV+LH+SLSG FN AMV++VG + F++KF P++L
Sbjct: 237 TDAEMPEMDGYRLTTEIRHDPRLRDLYVVLHTSLSGSFNLAMVQKVGCDNFLSKFQPEKL 296

Query: 299 GNAVKAAL 306
            + ++  L
Sbjct: 297 VDVIQDRL 304