Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., CheW protein from Pseudomonas syringae pv. syringae B728a

 Score =  298 bits (762), Expect = 1e-85
 Identities = 151/308 (49%), Positives = 210/308 (68%), Gaps = 4/308 (1%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M GILD+V+QRTQLVG+NRLE+L FRL GRQ + INVFKV+EVLQ PKLT MP  H  V 
Sbjct: 1   MAGILDTVDQRTQLVGENRLEILMFRLAGRQLFAINVFKVQEVLQLPKLTLMPQRHSFVC 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GV ++RGQT+ VID+S A+G RP      S +++ E+NR++QAFLV  V+RI+NM W+AI
Sbjct: 61  GVVNLRGQTLPVIDLSQAIGMRPLVPGPGSTIIVTEYNRSVQAFLVGGVDRIVNMNWDAI 120

Query: 121 LPPPNGTGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEF 180
           +PPP   G+ +YLTA++ +D++LVEIIDVEK+LAEI P N  +     E++     E   
Sbjct: 121 MPPPVSAGRQHYLTAISKVDDQLVEIIDVEKVLAEIVPYNAKVSR---EKLEDPVLENAR 177

Query: 181 VRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGP-ISNQISLVIS 239
            R +L+ DDS VA  Q++  +  +G ++    DG  A   L      G  +  ++ +V +
Sbjct: 178 GREVLLVDDSKVALAQLRDTLSQLGLKLHVASDGLKALNMLKAWADAGENVHEKLLMVFT 237

Query: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELG 299
           D EMPEMDGY LT EIR    L+ LY++LH+SLSG FN++MV++VG + F++KF PD+L 
Sbjct: 238 DAEMPEMDGYRLTTEIRNDARLRGLYIVLHTSLSGSFNESMVKKVGCDNFLSKFQPDKLV 297

Query: 300 NAVKAALV 307
             V+  L+
Sbjct: 298 EVVRERLL 305