Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Response regulator receiver:CheW-like protein from Pseudomonas syringae pv. syringae B728a

 Score =  198 bits (504), Expect = 1e-55
 Identities = 106/284 (37%), Positives = 167/284 (58%), Gaps = 6/284 (2%)

Query: 15  VGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVID 74
           V  + L LL F L   +   IN+ KV E++ CP LT +P  H  VKG+A +RG ++SVID
Sbjct: 5   VRADSLSLLLFTLRSGKLMAINLLKVSEIIPCPPLTHLPESHPHVKGIATLRGSSLSVID 64

Query: 75  MSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKSNYLT 134
           +S A+G RP  D D   +++ + +R+ Q   V +V +I++     I PPP G+   +++T
Sbjct: 65  LSRAIGERPLADPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSSSKSFIT 124

Query: 135 AVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRILIADDSSVAR 194
            VT +D  LV+++D+EK++  I P    + S+   ++A+ + E     RIL+ DDS VA 
Sbjct: 125 GVTQVDGVLVQVLDIEKVIHGIAPAQIVVQST---ELAKEDAELLSKARILVVDDSQVAL 181

Query: 195 KQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQISLVISDIEMPEMDGYTLTAE 254
           +Q    + ++G E  T +  K+A + LL++      + QI++V+SDIEM EMDGY LT  
Sbjct: 182 QQSIITLRNLGLECHTARSAKEAIDVLLDLQG---TARQINVVVSDIEMSEMDGYALTRT 238

Query: 255 IRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDEL 298
           +R   +  DLY++LH+SL    N    +  GANA + KF+  EL
Sbjct: 239 LRDTPDFSDLYILLHTSLDSAMNSEKSQIAGANAVLTKFSSPEL 282