Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chemotaxis protein CheV (RefSeq) from Shewanella amazonensis SB2B

 Score =  372 bits (954), Expect = e-108
 Identities = 190/307 (61%), Positives = 243/307 (79%), Gaps = 4/307 (1%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M+ IL+SVN+RTQLVGQNRLELL F+LNGRQR+GINVFKVKEVLQCP LT +P L+  V+
Sbjct: 1   MSSILESVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTGLPKLNPFVR 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVAHIRG T+SVID+S A GG+P  ++   F++I+E+NR++Q FLV+SVERIINM WEAI
Sbjct: 61  GVAHIRGTTISVIDLSAATGGKPIENIQNCFIIISEYNRSVQGFLVNSVERIINMNWEAI 120

Query: 121 LPPPNGTGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEF 180
           +PPP G G+ +YLTAVT ID ELVEI+DVEKIL EI+PV   +      Q+  +++ + F
Sbjct: 121 MPPPQGAGRYSYLTAVTEIDGELVEILDVEKILDEISPVRTAISEDTDAQLT-IDRGQHF 179

Query: 181 VRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSE-GPISNQISLVIS 239
              I++ DDS+VARKQ+ RA+ S+  ++ T KDG++A EKL  + +E   ++++I L+IS
Sbjct: 180 --HIMVIDDSAVARKQIIRALTSLELQIDTAKDGREALEKLKAISAEMTNVAHEIPLIIS 237

Query: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELG 299
           DIEMPEMDGYTLTAEIR   +LKD+ VILH+SLSGVFNQAMV++VGAN FIAKFNPDEL 
Sbjct: 238 DIEMPEMDGYTLTAEIRDDPKLKDIKVILHTSLSGVFNQAMVQKVGANDFIAKFNPDELA 297

Query: 300 NAVKAAL 306
            AV   L
Sbjct: 298 AAVNKHL 304