Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., purine-binding chemotaxis protein CheW (RefSeq) from Shewanella amazonensis SB2B

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 49/138 (35%), Positives = 83/138 (60%), Gaps = 3/138 (2%)

Query: 20  LELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAV 79
           L+ +TFRL+  + YGINV +V+EVL+  ++  +P     V G+ ++RG  V+VID     
Sbjct: 19  LQWVTFRLDN-ETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRF 77

Query: 80  GGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPN-GTGKS-NYLTAVT 137
           G +P    D + +VI E  + +   LV SV  ++ +R   I   PN GT +S  ++  V+
Sbjct: 78  GLQPAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVS 137

Query: 138 NIDNELVEIIDVEKILAE 155
           N DNEL+ ++D++K+L++
Sbjct: 138 NRDNELLILVDLDKLLSD 155