Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein CheV (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (494), Expect = 2e-54
 Identities = 102/279 (36%), Positives = 166/279 (59%), Gaps = 8/279 (2%)

Query: 22  LLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAVGG 81
           LL F L+  Q + I   K++E++   +L ++P  H  V G A +RGQT+SVIDM+ AVG 
Sbjct: 11  LLLFHLSRSQLFAIGTLKIRELVPYTQLNALPQSHPAVMGTATVRGQTISVIDMAAAVGY 70

Query: 82  RPTTDVDKS--FVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKSNYLTAVTNI 139
            P TD ++S  F++I +  R +  FLV  +++II   W  IL PP+  G++ +LT VT  
Sbjct: 71  PPVTDEERSKCFIIITDCQRMLIGFLVRGIDKIIECNWRDILSPPDNLGRNAFLTGVTRY 130

Query: 140 DNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRILIADDSSVARKQVQR 199
            ++LV+++DVE +L++I P+ ED    I   +  V++E+     IL+ DDS VARKQ+  
Sbjct: 131 QDKLVQLLDVELLLSKIFPIKEDKRIGI---LTDVQREQLKPMNILLVDDSKVARKQLSD 187

Query: 200 AIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQISLVISDIEMPEMDGYTLTAEIRRHN 259
           A+++I        +G+DA   + +   +      + +++SDIEMP +DGY L  E++   
Sbjct: 188 ALDAINISYRVASNGRDALSMMTQSADD---KRPVDILVSDIEMPGLDGYELAFEVKNDT 244

Query: 260 ELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDEL 298
            L   Y+ILH+SLS   + +  ++VGA+  + KF+  EL
Sbjct: 245 ALAAAYIILHTSLSSEISVSQAKQVGADEALTKFDAQEL 283