Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., chemotaxis protein CheV (RefSeq) from Shewanella amazonensis SB2B

 Score =  275 bits (702), Expect = 1e-78
 Identities = 144/311 (46%), Positives = 205/311 (65%), Gaps = 8/311 (2%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M  IL++V+QRTQLVG+NRLELL FRLN  Q + INVFKVKEV++ P L +MP  H  + 
Sbjct: 25  MAKILETVDQRTQLVGENRLELLLFRLNSTQLFAINVFKVKEVVKLPPLNAMPGSHPSIS 84

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVA+IRG ++ VI++  A+G +P      + ++I E+NR++Q FLV  VE I+NM W  I
Sbjct: 85  GVANIRGVSIPVINLRQAIGFQPMPAEADANLIITEYNRSVQGFLVGKVEHIVNMTWGDI 144

Query: 121 LPPPNGTGKSNYLTAVTNID----NELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQ 176
           +PPP   G++NYLTA+T +D    + LV IIDVEK+LAEI   +  +   + ++    + 
Sbjct: 145 MPPPKTAGRNNYLTAITRLDYQGVSNLVSIIDVEKVLAEIIHYDVRLSEGVLDESLLAKM 204

Query: 177 EKEFVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEG-PISNQIS 235
                 ++L+ DDS+ ARKQV+  +  +G E++   DG++A E L     EG  +  ++ 
Sbjct: 205 PG---HKLLVVDDSATARKQVKETLGQLGIEILEVSDGREALELLKGWADEGMNVPKELL 261

Query: 236 LVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNP 295
           ++I+D EMPEMDGY LT E+R    LKDLY+ L++SLSG FN AMVE+VG + FI+KF P
Sbjct: 262 MMITDAEMPEMDGYKLTFEVRNDPRLKDLYITLNTSLSGSFNNAMVEKVGCDQFISKFQP 321

Query: 296 DELGNAVKAAL 306
           D L   V+  L
Sbjct: 322 DRLVEVVQDRL 332