Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  284 bits (726), Expect = 2e-81
 Identities = 151/311 (48%), Positives = 213/311 (68%), Gaps = 8/311 (2%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M  +L+SV+QRTQLVG+NRLELL FR+N  Q + INVFKVKEV++ PKL+++P  H  +K
Sbjct: 1   MAKVLESVDQRTQLVGENRLELLLFRINATQLFAINVFKVKEVVKLPKLSALPGSHPSIK 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVA+IRG ++ VID+  A+G +P     ++ ++I E+NR++Q F+V  V+ IINM W  I
Sbjct: 61  GVANIRGTSIPVIDLRAAIGFQPMNSDQEANLIITEYNRSVQGFMVGKVDHIINMTWSDI 120

Query: 121 LPPPNGTGKSNYLTAVTNID----NELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQ 176
           +PPP  TG  NYLTA+T ++      LV IIDVEK+LAEI  V+ D+  S G  + +   
Sbjct: 121 MPPPKSTGSHNYLTAITKVEVDGATRLVSIIDVEKVLAEI--VHYDIAISEG-VLDEALV 177

Query: 177 EKEFVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEG-PISNQIS 235
           +K   R+ILIADDS+ AR+QV+  +  +G EV+ T DG  A + L     EG  I+ +I 
Sbjct: 178 DKMIGRKILIADDSATARRQVKDTLAPLGIEVIETSDGLQALKLLKRWCDEGRDINQEIL 237

Query: 236 LVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNP 295
           ++I+D EMPEMDGY LT E+R    + +L++ L++SLSG FN AMVE+VG + FI+KF P
Sbjct: 238 MLITDAEMPEMDGYRLTYEVRNDKRMANLFITLNTSLSGSFNNAMVEKVGCDRFISKFQP 297

Query: 296 DELGNAVKAAL 306
           D L + V+  L
Sbjct: 298 DLLVDVVQERL 308