Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  201 bits (512), Expect = 1e-56
 Identities = 107/283 (37%), Positives = 171/283 (60%), Gaps = 8/283 (2%)

Query: 22  LLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAVGG 81
           LL FRL+  Q + +   K++E++   KL+++P  H  + G A +RG T+ +IDM+ AVG 
Sbjct: 28  LLLFRLSHTQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPIIDMAAAVGY 87

Query: 82  RPTTDVD--KSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKSNYLTAVTNI 139
            P T  +   ++++I +  R +  FLV S+++II   W  I  PP+  GK+ +LT VT +
Sbjct: 88  APITPEECANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNLGKNAFLTGVTRV 147

Query: 140 DNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRILIADDSSVARKQVQR 199
           D++LV+++DVE +L++I P + D   +I   +  V++E      IL+ DDS VARKQ+  
Sbjct: 148 DDKLVQLLDVELLLSKIFPASPDTTRAI---LTDVQREILKPLNILLVDDSMVARKQLSD 204

Query: 200 AIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQISLVISDIEMPEMDGYTLTAEIRRHN 259
           A++SI    + T DG+DA   + E   EG     + L++SDIEMP +DGY L  E++   
Sbjct: 205 ALDSINIPYLVTSDGRDALSIMEEAAKEG---RPVDLLVSDIEMPGLDGYELAFEVKNTP 261

Query: 260 ELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELGNAV 302
            L D Y+ILH+SLS   + +   +VGAN  + KF+  EL +A+
Sbjct: 262 ALADAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELIDAM 304