Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., response regulator receiver modulated CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  134 bits (337), Expect = 3e-36
 Identities = 92/293 (31%), Positives = 153/293 (52%), Gaps = 20/293 (6%)

Query: 16  GQNRLELLTFRLNG--------RQRYGINVFKVKEVLQCPKLTSMPNLHR-LVKGVAHIR 66
           G N LE++ F +          R  YG+NV KV E+++ P +T +P+ H     G  ++R
Sbjct: 11  GTNELEIIEFYIEETLPGGGVYRGYYGMNVAKVLEIIRRPTVTGVPSKHHPAALGTFNLR 70

Query: 67  GQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNG 126
           G+ + ++D+   +G +     D   V+++EF+  + AFLVS V RI  + W  +  P   
Sbjct: 71  GRVLPLVDLGGWLGKQVAAS-DALKVIVSEFSGMVTAFLVSGVTRIHRLSWSQVEAPDMH 129

Query: 127 --TGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRI 184
             T     +  V   ++ +V ++D+EKI+A + P   D+ +++      V Q +++   +
Sbjct: 130 MQTYSGQSVIGVVRFEDRIVFLLDMEKIVASMNP-RADIGATLAAVEPVVTQGEQW--HV 186

Query: 185 LIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGP-----ISNQISLVIS 239
           LIADDSS  R  +   +E  GF V  T  G++A++ L++           I + + LV+S
Sbjct: 187 LIADDSSAIRNMIGSTLEKAGFRVTRTSSGREAWDVLVDWRKRSEEERKHIYDYVDLVVS 246

Query: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAK 292
           DIEMPEMDG+ LT  I+    L+ L V+L SSL     +     VGA+  I+K
Sbjct: 247 DIEMPEMDGHNLTRRIKEDQVLQKLPVVLFSSLITDALRHKGAAVGADDQISK 299