Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., response regulator receiver modulated CheW protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (310), Expect = 5e-33
 Identities = 98/305 (32%), Positives = 157/305 (51%), Gaps = 34/305 (11%)

Query: 30  RQRYGINVFKVKEVLQCPKLTSMPNL-HRLVKGV-AHIRGQTVSVIDMSLAVG-GRPTTD 86
           R+RYG+NV KV E+++   +T++P + H  V G   H  G+ + ++D++  +G  R T+ 
Sbjct: 80  RRRYGVNVAKVVEIIRMQPITALPQMPHPAVLGAFPHRDGRVIPLVDLAKYLGIPRDTSG 139

Query: 87  VDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKS--NYLTAVTNIDNELV 144
             K  +++ EFN  I  F+VS V RI  + W  +  P     ++  N +T +  +D  +V
Sbjct: 140 EPK--IIVTEFNTVITGFMVSGVNRIHRISWTDVEAPGRFLQEASRNSITGMVRLDERVV 197

Query: 145 EIIDVEKILAEITPV-----------------NEDMDSSIG--EQIAQVEQEKEFVRR-- 183
            ++D+E I+AE+ P                   +  D++ G  E +  V Q     RR  
Sbjct: 198 FLLDMESIVAEMHPDLSIRMERPLASASAGERGQGADAADGATEAVPPVAQPDLPPRRYR 257

Query: 184 ILIADDSSVARKQVQRAIESIG-FEVVTTKDGKDAYEKLLEMLSEG-----PISNQISLV 237
           IL ADDS   R+ V+  +E+ G FE++   DG++A++ L  +  E      P+S+ +  V
Sbjct: 258 ILHADDSGSVRRLVRNLMEASGRFELLQANDGQEAWDMLDGLRREAESRGVPLSDLVQAV 317

Query: 238 ISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDE 297
           +SDIEMP MDG TL   I+  + L+ L V L SSL         E VGA+A  AK +  +
Sbjct: 318 VSDIEMPRMDGLTLCRRIKEDSALRALPVALFSSLVSERLGHKGESVGADAQFAKPDLQQ 377

Query: 298 LGNAV 302
           L   V
Sbjct: 378 LSQKV 382