Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.0 bits (193), Expect = 7e-20
 Identities = 47/138 (34%), Positives = 82/138 (59%), Gaps = 3/138 (2%)

Query: 20  LELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAV 79
           L+ +TF+L+  + YGINV +V+EVL+  ++  +P     V G+ ++RG  V+VID     
Sbjct: 19  LQWVTFKLDN-ETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTRSRF 77

Query: 80  GGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPN-GTGKS-NYLTAVT 137
           G +     D + +VI E  + +   LV SV  ++ +R   I   PN GT +S  ++  V+
Sbjct: 78  GLQSAEVDDSTRIVIIEAEKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESAKFIQGVS 137

Query: 138 NIDNELVEIIDVEKILAE 155
           N DNEL+ ++D++K+L++
Sbjct: 138 NRDNELLILVDLDKLLSD 155