Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  195 bits (495), Expect = 1e-54
 Identities = 105/283 (37%), Positives = 171/283 (60%), Gaps = 8/283 (2%)

Query: 22  LLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAVGG 81
           LL FRL+  Q + +   K++E++    L+ +P  H  + G A IRG T+ V+DM+ A+G 
Sbjct: 11  LLLFRLSQHQIFALGTLKIRELVPYTPLSKIPQSHPTILGAATIRGHTIPVVDMAAAIGY 70

Query: 82  RPTTDVDKS--FVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKSNYLTAVTNI 139
           RP +D ++   +++I +  R I  FLV ++++II   W  I  P    GK+ +LT VT  
Sbjct: 71  RPVSDEERQHCYIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANLGKNAFLTGVTRY 130

Query: 140 DNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRILIADDSSVARKQVQR 199
           DN+LV+++DVE +L+++ P   + + +I   +  V++EK   RRIL+ DDS VARKQ+  
Sbjct: 131 DNQLVQLLDVELLLSKVFPDAPEANRAI---LTDVQREKLKPRRILLVDDSKVARKQLSD 187

Query: 200 AIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQISLVISDIEMPEMDGYTLTAEIRRHN 259
           A++SI      T DG++A   + +  +E    + I +++SDIEMP +DGY L  E+R + 
Sbjct: 188 ALDSINIPYFVTPDGREALSIMEQAAAE---HHPIDILVSDIEMPGLDGYELAFEVRDNP 244

Query: 260 ELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELGNAV 302
            L + Y+ILH+SLS   + +   +VGAN  + KF+  EL  A+
Sbjct: 245 LLANAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVEAM 287