Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  277 bits (709), Expect = 2e-79
 Identities = 149/311 (47%), Positives = 208/311 (66%), Gaps = 8/311 (2%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M  +L +V+QRT LVG+NRLELL FR+N  Q + INVFKVKEV++ P L +MP  H  + 
Sbjct: 1   MANVLATVDQRTNLVGENRLELLLFRINSMQLFAINVFKVKEVVKLPPLNAMPGSHPHIS 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVA+IRG ++ VID+  A+G +P    D + ++I E+NR++Q FLV  VE IINM W  I
Sbjct: 61  GVANIRGMSIPVIDLRSAIGFKPVPPDDTANMIITEYNRSVQGFLVGKVEHIINMTWSDI 120

Query: 121 LPPPNGTGKSNYLTAVTNID----NELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQ 176
           +PPP   G++NYLTA+T ID    ++LV IIDVEK+LAEI  V+ D+  S G  + +   
Sbjct: 121 MPPPKTAGRNNYLTAITRIDYQGQSQLVSIIDVEKVLAEI--VHYDISLSEG-VLDESLL 177

Query: 177 EKEFVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGP-ISNQIS 235
           +K   R+ILI DDSS AR+QV+  +  +G E++   DG  A   L +   EG  ++ ++ 
Sbjct: 178 DKMPGRKILIVDDSSTARRQVRETLGQLGIEIIEASDGLQALHLLQKWRDEGKNVTKELL 237

Query: 236 LVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNP 295
           ++I+D EMPEMDGY LT E+R    + DL++ L++SLSG FN AMVE+VG + FI+KF P
Sbjct: 238 MMITDAEMPEMDGYKLTYEVRNDKAMADLFITLNTSLSGSFNNAMVEKVGCDRFISKFQP 297

Query: 296 DELGNAVKAAL 306
           D L   V+  L
Sbjct: 298 DLLVEVVQDRL 308