Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  274 bits (701), Expect = 2e-78
 Identities = 147/311 (47%), Positives = 209/311 (67%), Gaps = 8/311 (2%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M  +L +V+QRT+LVG+NRLELL FR+N  Q + INVFKVKEV++ P L SMP  H  + 
Sbjct: 1   MANVLATVDQRTKLVGENRLELLLFRINSTQLFAINVFKVKEVVKLPPLNSMPGSHPHIF 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVA+IRG ++ VID+  A+G +P    D + ++I E+NR++Q FLV  VE IINM W  I
Sbjct: 61  GVANIRGMSIPVIDLRSAIGFKPVPPGDDANMIITEYNRSVQGFLVGKVEHIINMTWSDI 120

Query: 121 LPPPNGTGKSNYLTAVTNID----NELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQ 176
           +PPP   G++NYLTA+T I+    ++LV IIDVEK+LAEI  V+ D+  S G  + +   
Sbjct: 121 MPPPKTAGRNNYLTAITRIEYQGQSQLVSIIDVEKVLAEI--VHYDIRLSEG-VLDESLL 177

Query: 177 EKEFVRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSEGP-ISNQIS 235
           +K   +++LI DDSS AR+QV+  +  +G E++   DG  A   L +   EG  ++ ++ 
Sbjct: 178 DKMPGKKVLIVDDSSTARRQVRETLGQLGIEIIEASDGLQALHLLQKWRDEGKNVAQELL 237

Query: 236 LVISDIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNP 295
           ++I+D EMPEMDGY LT E+R    + DL++ L++SLSG FN AMVE+VG + FI+KF P
Sbjct: 238 MMITDAEMPEMDGYKLTYEVRNDKAMSDLFITLNTSLSGSFNNAMVEKVGCDRFISKFQP 297

Query: 296 DELGNAVKAAL 306
           D L   V+  L
Sbjct: 298 DLLVEVVQDRL 308