Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  191 bits (486), Expect = 1e-53
 Identities = 104/283 (36%), Positives = 169/283 (59%), Gaps = 8/283 (2%)

Query: 22  LLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVKGVAHIRGQTVSVIDMSLAVGG 81
           LL FRL+  Q + +   K++E++    L+ +P  H  + G A IRG T+ V+DM+ A+G 
Sbjct: 11  LLLFRLSQTQVFALGTLKIRELVPYTPLSKIPQSHPTIMGAATIRGHTIPVVDMAAAIGY 70

Query: 82  RPTTDVDKS--FVVIAEFNRTIQAFLVSSVERIINMRWEAILPPPNGTGKSNYLTAVTNI 139
           RP +D ++   +++I +  R I  FLV ++++II   W  I  P    G++ +LT VT  
Sbjct: 71  RPISDEERQHCYIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANLGRNAFLTGVTRY 130

Query: 140 DNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEFVRRILIADDSSVARKQVQR 199
           DN+LV+++DVE +L+++ P   + + +I   +  V++EK    RIL+ DDS VARKQ+  
Sbjct: 131 DNQLVQLLDVELLLSKVFPDAPEANRAI---LTDVQREKLKPMRILLVDDSKVARKQLSD 187

Query: 200 AIESIGFEVVTTKDGKDAYEKLLEMLSEGPISNQISLVISDIEMPEMDGYTLTAEIRRHN 259
           A++SI      T DGK+A   + +  +E    + I +++SDIEMP +DGY L  E+R + 
Sbjct: 188 ALDSINIPYFVTPDGKEALSIMEQAAAE---HHPIDILVSDIEMPGLDGYELAFEVRDNP 244

Query: 260 ELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELGNAV 302
            L   Y+ILH+SLS   + +   +VGAN  + KF+  EL  A+
Sbjct: 245 LLAKAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVEAM 287