Pairwise Alignments

Query, 308 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  378 bits (970), Expect = e-109
 Identities = 191/307 (62%), Positives = 243/307 (79%), Gaps = 4/307 (1%)

Query: 1   MTGILDSVNQRTQLVGQNRLELLTFRLNGRQRYGINVFKVKEVLQCPKLTSMPNLHRLVK 60
           M+ ILDSVN+RTQLVGQNRLELL F+LNGRQR+GINVFKVKEVLQCP LT++P L+  VK
Sbjct: 1   MSSILDSVNKRTQLVGQNRLELLLFKLNGRQRFGINVFKVKEVLQCPPLTALPKLNPYVK 60

Query: 61  GVAHIRGQTVSVIDMSLAVGGRPTTDVDKSFVVIAEFNRTIQAFLVSSVERIINMRWEAI 120
           GVAHIRG T+SVID+S A GGRP    +  F++I+E+NR++Q FLVSSVERIINM WEAI
Sbjct: 61  GVAHIRGTTISVIDLSAATGGRPLASTENCFIIISEYNRSVQGFLVSSVERIINMNWEAI 120

Query: 121 LPPPNGTGKSNYLTAVTNIDNELVEIIDVEKILAEITPVNEDMDSSIGEQIAQVEQEKEF 180
           +PPP G G+ +YLTAVT I+ ELVEI+DVEKIL EI+PV   +   + EQ+  +++ + +
Sbjct: 121 MPPPQGAGRYSYLTAVTEIEGELVEILDVEKILDEISPVKTAISEEVNEQLT-IDRSQHY 179

Query: 181 VRRILIADDSSVARKQVQRAIESIGFEVVTTKDGKDAYEKLLEMLSE-GPISNQISLVIS 239
              I++ DDS+VARKQ+ RA+ES+  ++ T KDG++A +KL  +  E   ++ +I L+IS
Sbjct: 180 --HIMVIDDSAVARKQIIRALESLNLQIDTAKDGREALDKLKAIAGEMNNVAEEIPLIIS 237

Query: 240 DIEMPEMDGYTLTAEIRRHNELKDLYVILHSSLSGVFNQAMVERVGANAFIAKFNPDELG 299
           DIEMPEMDGYTLTAEIR   +LK + V+LH+SLSGVFNQAMV++VGAN FIAKFNPDEL 
Sbjct: 238 DIEMPEMDGYTLTAEIRDDPKLKHIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELA 297

Query: 300 NAVKAAL 306
            AV   L
Sbjct: 298 AAVNKHL 304