Pairwise Alignments

Query, 275 a.a., chemotaxis protein methyltransferase 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 1390 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 89.0 bits (219), Expect = 5e-22
 Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 28  DSKQYLVRSRLSPLVTKFKLSSLSDL--LRDVVTGRNRDLRVAAVDAMTTNETLWFRDSY 85
           D + Y   + L  +  + ++++L D+      + GR  +      D M    T +FRD  
Sbjct: 263 DFRHYKQATVLRRIERRMQVNALPDMPSYARYLQGRPEETPELLAD-MLIGVTNFFRDRD 321

Query: 86  PFTVLADKLLPEMAANK-----RPIKIWSAASSSGQEPYSMAMTILEVQQ-KRPGLLPSV 139
            F  L   ++P +   K     + +++WSAA S+G+E YS+ M + +       G    +
Sbjct: 322 AFEALERDIIPALLEQKAGTDDKTLRVWSAACSTGEEAYSLGMLLADQAAITGAGSELKL 381

Query: 140 SITATDISASMLDMCRAGIYDNLALGRGLSPERRRVFFEDAGDGRMKVKDNVKRLVNFRP 199
            + ATDI    L+  R G Y    L   +SP R R +F      + ++   ++  + F  
Sbjct: 382 QVFATDIDDRALETARNGAYPEAIL-TDVSPTRLRQYFVK-DQNQFRLHKELRERILFAR 439

Query: 200 QNLMESYSLLGKFDIIFCRNVLIYFSPDMKSKVLNQMAASLNPGGYLLLGASESLTGLTD 259
            N++       + D+I CRN++IY   D++ +VL     +LNPGGYL LG SE+      
Sbjct: 440 HNILRDPPF-SRLDLISCRNLMIYLDKDIQIEVLRMFHFALNPGGYLFLGNSETADACAQ 498

Query: 260 KFEMV 264
            F  V
Sbjct: 499 LFTPV 503