Pairwise Alignments

Query, 138 a.a., flagellar basal body rod protein FlgC from Vibrio cholerae E7946 ATCC 55056

Subject, 147 a.a., flagellar basal-body rod protein FlgC from Pseudomonas fluorescens FW300-N2C3

 Score =  136 bits (342), Expect = 1e-37
 Identities = 71/147 (48%), Positives = 98/147 (66%), Gaps = 9/147 (6%)

Query: 1   MSLFSVFNVTGSAMSAESVRLNTTSSNLANADSISSSAKDTYKARHAVF---------GA 51
           MS+ SVFN+ GSAMSA++ RLNT +SN+ANA+++SSS   TY+ARH VF         G 
Sbjct: 1   MSIASVFNIAGSAMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQSGG 60

Query: 52  ELSKARFNRDPNVPVKVLGIVESDKPLVAEFNPEHPLANDEGYIYKSNVNVMEEMANMIS 111
             S  +        V+VLG+VE    L A + P HP A+ +GY+Y  NVNV+EEMA+MIS
Sbjct: 61  SDSLFQDQEAAGQGVQVLGVVEDQSNLEARYEPNHPAADAKGYVYYPNVNVVEEMADMIS 120

Query: 112 ASRSYQTNVQVADASKQMLLRTLQMGQ 138
           ASRS+QTN ++ + +K M+ + L +GQ
Sbjct: 121 ASRSFQTNAEMMNTAKAMMQKVLTLGQ 147