Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., Flagellar basal-body rod modification protein FlgD from Pseudomonas fluorescens FW300-N2E2

 Score =  138 bits (348), Expect = 8e-38
 Identities = 71/203 (34%), Positives = 122/203 (60%), Gaps = 1/203 (0%)

Query: 31  TGQKSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSM 90
           TG+K L ++ FL LL  QL  Q+P +P  N + +AQ+A F++++GI  +N     +  + 
Sbjct: 38  TGKKELGKDAFLQLLVTQLKNQNPLEPQDNGEFVAQLAQFSSLEGITTLNETVSGIAGNY 97

Query: 91  TSNQALQASSLVGRDVLVPGAAGMKKPDGGMAAMVKLPQSIDNLFIRIENEAGQLVRTFD 150
            S+QALQASSLVGR V+ PG   +      +   V +P S+ ++ ++I ++ G+ VRT D
Sbjct: 98  NSSQALQASSLVGRSVIAPGDKAVVDTSKSLNGTVVVPTSVSSVAVKIVDKDGKTVRTID 157

Query: 151 VGAKSSGDNRVEWDGKDQNGNPLPGGKYKVKASGLLDGESKEFEVSTYANVNSVLLGKGD 210
           +G++++G++   WDGK+  G  +  G Y   AS  +DG++     +  A V+SV + +  
Sbjct: 158 LGSQNAGNSAFIWDGKNDAGTVVESGTYTFAASTTIDGKATSLITNLPATVSSVTISQTG 217

Query: 211 GNVLLNLAGFDAPVRLAEVLEVG 233
           G ++LNLAG  + + L++V  +G
Sbjct: 218 GELMLNLAGLGS-IALSKVQTIG 239