Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., Flagellar hook capping protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 10/210 (4%)

Query: 26  KPDETTGQKSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFES 85
           K  ++ G+ +     FL+LLT QL  QDP  P+ + +   Q+  FA V+     N   E 
Sbjct: 19  KAGKSRGKLTSDMNTFLTLLTSQLKNQDPLSPMDSTEFTNQLVQFAQVEQQINTNDNMEK 78

Query: 86  LNSSMTSNQALQASSLVGRDVLVPGAAGMKKPDGGMAAMVKLPQSIDNLFIRIENEAGQL 145
           L +   ++QA  A   +G+ V       +   DG       L  + DN+ I + +E   L
Sbjct: 79  LLAVSGNSQAAMAVGYLGKYVEAESTV-VALQDGQAVFTYGLTAAADNVTIALYDEKDNL 137

Query: 146 VRTFDVGAKSSGDNRVEWDGKDQNGNPLPGGKYKVKASGLLDGESKEFEVSTYANVNSVL 205
           VR F  G  + G +++ W+GKD  G  L  G Y++  +       K+  + T++     +
Sbjct: 138 VRAFQ-GDLTQGLHKITWNGKDSYGEKLDDGTYRIAVTAT---SKKDGSIETWSTTIGKV 193

Query: 206 LG---KGDGNVLLNLAGFDAPVRLAEVLEV 232
            G    G G  LL L      V L +VL V
Sbjct: 194 TGIASDGKGGTLLGLG--STSVDLTKVLGV 221