Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., flagellar hook capping protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 86.3 bits (212), Expect = 5e-22
 Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 12/198 (6%)

Query: 31  TGQKSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGKMNTQFESLNSSM 90
           T    L ++ FL+LL  QL+ QDP  P+ + + +AQ+A F +++ +  ++T    LN+S 
Sbjct: 22  TKNDELDKQAFLNLLVAQLSHQDPLNPMDDKEFVAQLAQFTSLEQLTNISTGITDLNASA 81

Query: 91  TSNQALQASSLVGRDVLVPG----AAGMKKPDGGMAAMVK-----LPQSIDNLFIRIENE 141
              Q   A   +G++V   G        K   G     V        + + N +I I + 
Sbjct: 82  KQQQMSAAVGYIGKEVTASGYEISKTSQKDSTGATVNSVSTVYFTTQEQVSNGYINIYDS 141

Query: 142 AGQLVRTFDVGAKSSGDNRVEWDGKDQNGNPLPGGKYKVKASGL-LDGESKEFEVSTYAN 200
              LVRT  +GAK  G  + +WDGKD  G  +P G Y V   G   DG+S          
Sbjct: 142 QMNLVRTELMGAKQPGTYQYKWDGKDYQGTIVPDGVYAVAMYGEGTDGKSVYITTQVSGQ 201

Query: 201 VNSVLLGKGDGNVLLNLA 218
           V+ V+  K D    L+LA
Sbjct: 202 VSGVV--KVDDEPYLSLA 217