Pairwise Alignments

Query, 235 a.a., flagellar hook assembly protein FlgD from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., basal-body rod modification protein FlgD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  100 bits (250), Expect = 2e-26
 Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 1/179 (0%)

Query: 19  KALQEQKKPDETTGQKSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDGIGK 78
           +A  E +   + +G   L ++ FL LL  QL  QDP  P+ + + +AQ+A F +++ +  
Sbjct: 11  QAENEFQSAVKKSGNADLGKDAFLQLLVTQLKHQDPLNPMDDKEFVAQLAQFTSLEQLMG 70

Query: 79  MNTQFESLNSSMTSNQALQASSLVGRDVLVPGAAGMKKPDGGMAAMVKLPQSIDNLFIRI 138
           +NT   S+N +    Q + A S +G+DVL  G    K  DG       + + I    I I
Sbjct: 71  INTGVTSMNEAFKQQQMMNAVSYIGKDVLASGDQISKIKDGVSKLYFSIDEPITQGVINI 130

Query: 139 ENEAGQLVRTFDVGAKSSGDNRVEWDGKDQNGNPLPGGKYKVKASGLLDGESKEFEVST 197
            N + +LVR+  + AK +GD    WDGKD  GN +  G YKV A    + + K   VST
Sbjct: 131 FNASNELVRSEFISAKQAGDYEYVWDGKDYQGNAMADGLYKV-AMAAENDKGKAVLVST 188