Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score =  198 bits (504), Expect = 2e-55
 Identities = 138/430 (32%), Positives = 206/430 (47%), Gaps = 49/430 (11%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63
           ++L+GLSA    LNT  NNIAN+ T GFK SR  FG +Y+         T   GV+    
Sbjct: 5   IALTGLSAVNEQLNTIGNNIANSGTVGFKSSRTNFGSLYAE--------TQAMGVEVIGT 56

Query: 64  AQQFHEGSSIY-TNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTAND 122
            Q   +G ++  TN  LDL I+G GFF     R        TR G F  DK+S++  +  
Sbjct: 57  TQSISQGGALTSTNRTLDLAISGGGFFVT---RASNGDVGYTRAGIFGTDKDSYITNSLG 113

Query: 123 EFLLGYEV----NPDTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALF 178
           + L GY      N  TG V   + +   IP      + T  +   ANL AN ++   A F
Sbjct: 114 QRLQGYPADATGNLQTGTVGDLQLRSGGIPA-----RATDALSFVANLDANQEVPTVA-F 167

Query: 179 DITDPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQTYYTVTDKTGEKPINVVGG 238
           D    ++YN T ++ +YDS G+ + LT Y++K  +  N W  +Y V              
Sbjct: 168 DPLAADSYNSTYTTKLYDSQGKEHTLTQYFVKTAD--NNWNAHYYV-------------- 211

Query: 239 DAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDLNGADVNQTLSFSLDSA 298
           D A+  G     + F+  G L++   G   +  PL GG  P+          +       
Sbjct: 212 DGAALAG-APQALTFDTSGVLAT-PIGTVALAAPLTGGVAPL---------AIQLDYSGT 260

Query: 299 TQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVRVANEQGLD 358
           +Q+ + F +T     G   G  T +  +++G V A+YSNG     G+V L    N +GL 
Sbjct: 261 SQYGSEFSVTNNRATGYAAGEQTGMSVEKDGKVYASYSNGERMLQGQVVLASFVNAEGLK 320

Query: 359 KKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQRNFQANSR 418
              GT W  T  SGA + G    G +G++++G+LE SN+D+TQ+LV L+  QRN+QAN++
Sbjct: 321 NISGTAWTETAASGAAMLGAPGVGQYGTLASGALESSNVDLTQQLVGLMEGQRNYQANTQ 380

Query: 419 ALEVHNGLQQ 428
            +  +  L Q
Sbjct: 381 VISTNKELTQ 390