Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., flagellar hook protein FlgE (RefSeq) from Shewanella amazonensis SB2B

 Score =  383 bits (984), Expect = e-111
 Identities = 215/455 (47%), Positives = 284/455 (62%), Gaps = 30/455 (6%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63
           ++LSG++AAQ DLNTT+NNIAN NT GFKESRAEF DVY+ S+F+N+KT  G GV   +V
Sbjct: 5   IALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYAASIFSNSKTQVGGGVTTTQV 64

Query: 64  AQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTANDE 123
           AQQFH+GS  +T+N LDL I+G GFF  + D    +    TR GAF +D N+++V +   
Sbjct: 65  AQQFHQGSLQFTSNALDLAISGGGFFVTSADPSA-RDYSFTRAGAFKVDSNNYLVDSAGN 123

Query: 124 FLLGYEVNP--DTGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDIT 181
           FL  + V+   ++  V     +P+ IP   G P  T N+ +  NL A    KDPA FD  
Sbjct: 124 FLQTFPVDKFGNSTSVSLTTTRPVQIPDTAGSPVMTENVGVQMNLNAGEKTKDPAAFDPD 183

Query: 182 DPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQA----NTWQTYYTVTDKTGEKPINVVG 237
           DP T+N +TSSTIYDS+G+P+ LTTY+++  + A    N W  YY +  +    P+N+ G
Sbjct: 184 DPTTFNNSTSSTIYDSLGEPHILTTYFVRPNDGAYTGENNWVAYYALDGQ----PVNLGG 239

Query: 238 GDAASPT------------------GHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANP 279
           G     T                  G  G  + FN+ GT +  N    I TEPLG G   
Sbjct: 240 GAGTYQTDTDGDGVPDTPATAQTTGGWTGSVLTFNSTGTYTGTNPAI-ITTEPLGIGGAG 298

Query: 280 VDLNGADVNQTLSFSLDSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGI 339
           +   GAD +QTL+ +  + TQ+A+ FE+T+  QDG T G LT ++  E+G + A YSNG 
Sbjct: 299 ILGPGADGSQTLTINFANPTQYASAFEVTELTQDGTTVGRLTNVEVGEDGLIKAAYSNGS 358

Query: 340 NTTLGRVALVRVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDM 399
              LGRVALVR ANEQGL + G T W  +  SG  + GE+N G+FG+I + +LEQSN+D+
Sbjct: 359 TVPLGRVALVRFANEQGLTQVGNTSWKESLASGTALAGEANSGTFGAIRSAALEQSNVDL 418

Query: 400 TQELVDLISAQRNFQANSRALEVHNGLQQNILQIR 434
           T ELVDLISAQRNFQANSR LEV+N LQQ ILQIR
Sbjct: 419 TTELVDLISAQRNFQANSRTLEVNNTLQQTILQIR 453