Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., flagellar hook protein FlgE (RefSeq) from Shewanella loihica PV-4

 Score =  369 bits (946), Expect = e-106
 Identities = 211/453 (46%), Positives = 286/453 (63%), Gaps = 26/453 (5%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63
           ++LSG++AAQ DLNTT+NNIAN NT GFKESRAEF DVY++S+F N+KTT G GV  A+V
Sbjct: 5   IALSGIAAAQKDLNTTANNIANVNTTGFKESRAEFADVYASSIFANSKTTVGGGVTTAQV 64

Query: 64  AQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTANDE 123
           AQQF +GS  +T+N LD+ I G GFF V    +  Q    TR GAF +D +S++V +   
Sbjct: 65  AQQFQQGSLQFTSNALDMAINGGGFF-VTSSEVGSQDLSYTRAGAFKVDADSYLVNSAGN 123

Query: 124 FLLGYEVNPD--TGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDIT 181
           +L  + V+ D  +  V     +P+ IP   G P++T NI +  NL A     DPA F+  
Sbjct: 124 YLQTFPVDKDGNSTSVSLTTTQPVKIPDTAGSPQKTDNIGIQMNLNAGEGTLDPANFNPN 183

Query: 182 DPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANT----WQTYYTVT------------ 225
           DP+TYN +TS T+YDS+G+P+ LTTY+++    A T    W  +Y V             
Sbjct: 184 DPDTYNNSTSVTMYDSLGEPHILTTYFVRPPEAAYTGTSNWVAFYAVDGKQVDLAGAAGT 243

Query: 226 ---DKTGEKPINVVGGDAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLG-GGANPVD 281
              D TG+   +  G  A + +G  G  + FN+ G  +  ++   I TE LG GGAN + 
Sbjct: 244 YGRDTTGDGVADSTG-TAVNASGWKGSVLSFNDTGAYTG-SDPAVITTETLGVGGANVLG 301

Query: 282 LNGADVNQTLSFSLDSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINT 341
             G D +QTL+ + +S TQ+A+PFE+T+  QDG T G LT ++   +G + A+YSNG   
Sbjct: 302 -PGTDGSQTLTLNFNSPTQYASPFEVTELSQDGTTVGRLTNVEVGADGLINASYSNGSTV 360

Query: 342 TLGRVALVRVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQ 401
            L RVAL R +NEQGL + G T W  +  SG  + GE+N G+FGSI + +LEQSN+D+T 
Sbjct: 361 PLARVALARFSNEQGLTQVGNTSWKESLDSGPALAGEANSGTFGSIRSSALEQSNVDLTT 420

Query: 402 ELVDLISAQRNFQANSRALEVHNGLQQNILQIR 434
           ELVDLISAQRNFQANSR LEV+N LQQ +LQIR
Sbjct: 421 ELVDLISAQRNFQANSRTLEVNNTLQQTVLQIR 453