Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., protein of unknown function DUF1078 domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  128 bits (321), Expect = 5e-34
 Identities = 125/504 (24%), Positives = 198/504 (39%), Gaps = 82/504 (16%)

Query: 3   YVSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFT-NAKTTP----GQG 57
           Y   +G+      +   SNN+AN NT GFK+ +A F D+ S    T N+ +T     G G
Sbjct: 6   YSGATGMKTLAQGMQAVSNNLANVNTVGFKQQQALFEDLMSQYAGTGNSASTSISQVGLG 65

Query: 58  VQAAKVAQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFM 117
            +   +   + +GS     +  DL I G GFF V+    +  +   TR G F  DK   +
Sbjct: 66  SRLTDIRTVYGQGSYESGTDITDLSINGKGFFQVS----LGGKTHYTRAGNFRFDKGGNL 121

Query: 118 VTANDEFLLGYEVNPDTGDVLSYEPKPINIPP-----QFGKPKQTANIDLGANLPANGDL 172
           V  N   L G  +             PI++PP          K T +I    NL +    
Sbjct: 122 VDPNGFVLNGRAITNGVEGATG----PISLPPGADGRNVMPAKATTSITALNNLGSGDRS 177

Query: 173 KDPA--LFDITDP-----------ETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQANTWQ 219
            D A   F +                Y    S  +YD+ G  + +T Y+           
Sbjct: 178 SDAANPYFSLLSKWNGTAQSPLGDSAYTYKQSIKVYDATGNAHDVTIYFDGAGQSGGNKH 237

Query: 220 TYYTVTDKTGEKPINVVGGDAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPL------ 273
             + V+         + G  AA     +  T+ FN+ G L +++   P  T+        
Sbjct: 238 FEFVVSMDPAHDGSGMAGTSAAGLL--MSGTLTFNSSGQLVNMSAYTPTGTDATNLSNWA 295

Query: 274 ------------------GGGANPVDLN--------------------GADVNQTL---- 291
                             GGG   V L+                    G++ +  +    
Sbjct: 296 PASFGADGLPQFTATFASGGGTQVVGLDLGLTSSTGAWTAGAGSPAAVGSNASNLMGMGG 355

Query: 292 -SFSLDSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTTLGRVALVR 350
            + +  S T +       +  QDG   GFL  ID   +G +   YSNG N  L  + L R
Sbjct: 356 ATLAAVSTTAYGGSSSEIRSKQDGYAQGFLAGIDISADGIITGRYSNGQNDDLYHITLYR 415

Query: 351 VANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQELVDLISAQ 410
             +E GL ++G   + AT  SGA   G  +  ++G+++  SLEQSN+ M +E V++I  Q
Sbjct: 416 FTSEDGLRREGMNHFSATLESGAAQEGLPDTQNYGTVAAKSLEQSNVSMEREFVNMIIYQ 475

Query: 411 RNFQANSRALEVHNGLQQNILQIR 434
           R FQ NS+++   + + Q  L+++
Sbjct: 476 RGFQTNSKSIMTADSMIQKALELK 499