Pairwise Alignments

Query, 434 a.a., flagellar hook protein FlgE from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., flagellar hook protein FlgE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  387 bits (993), Expect = e-112
 Identities = 218/452 (48%), Positives = 283/452 (62%), Gaps = 24/452 (5%)

Query: 4   VSLSGLSAAQMDLNTTSNNIANANTFGFKESRAEFGDVYSTSLFTNAKTTPGQGVQAAKV 63
           ++LSG+SAAQ DLNTT+NNIANANT GFKESRAEF DVY+ S+F+N+KT  G GV  ++V
Sbjct: 5   IALSGISAAQKDLNTTANNIANANTIGFKESRAEFADVYANSIFSNSKTAVGGGVATSQV 64

Query: 64  AQQFHEGSSIYTNNPLDLRIAGTGFFAVAKDRLVPQQNELTRNGAFHLDKNSFMVTANDE 123
           AQQFH+GS   TNN LDL I G GFF  A + +    ++ TR GAF +DKN++MV +   
Sbjct: 65  AQQFHQGSLQLTNNSLDLAIKGGGFFVTASE-IGTLDHQFTRAGAFKVDKNNYMVDSAGN 123

Query: 124 FLLGYEVNPD--TGDVLSYEPKPINIPPQFGKPKQTANIDLGANLPANGDLKDPALFDIT 181
           FL  + V+ D  +  V     KP+ IP   G P QT N+ L  NL A     DPA FD  
Sbjct: 124 FLQTFPVDKDGNSTSVSLTTAKPVQIPDTAGSPVQTENVTLQMNLNAKEGSLDPAAFDPL 183

Query: 182 DPETYNRTTSSTIYDSMGQPYKLTTYYLKDMNQA----NTWQTYYTV------------- 224
           D +TYN  TS TIYDS+G+P+ +TTY++K  N +    N W  YY +             
Sbjct: 184 DSKTYNSVTSMTIYDSLGEPHIMTTYFVKPNNGSYNGENNWVAYYAIDGKQVDVSGPAGT 243

Query: 225 --TDKTGEKPINVVGGDAASPTGHVGHTMRFNNDGTLSSLNNGQPIVTEPLGGGANPVDL 282
             TD  G+   +  G  A +  G  G  ++FN+ G  +  ++   + TE LG G   V  
Sbjct: 244 YQTDTNGDGTPDATG-TAQTTGGWKGSVLKFNSVGVYTG-SDPAVVTTEALGVGGAGVLG 301

Query: 283 NGADVNQTLSFSLDSATQFAAPFELTKFDQDGATTGFLTKIDFDENGSVLATYSNGINTT 342
            GAD  Q ++   ++ TQ++APF  T+  QDG T G LT ++  E+G + A+YSNG    
Sbjct: 302 PGADGTQAVNIKFNAPTQYSAPFAATELSQDGTTVGRLTNVEIGEDGLITASYSNGSTVP 361

Query: 343 LGRVALVRVANEQGLDKKGGTQWDATQFSGAKIWGESNKGSFGSISNGSLEQSNIDMTQE 402
           L RVALVR ANEQGL + G T W A+  SG  + GE N G+FGS+S+ +LEQSNID+T E
Sbjct: 362 LARVALVRFANEQGLTQVGNTSWKASLSSGPALAGEPNSGTFGSLSSSALEQSNIDLTTE 421

Query: 403 LVDLISAQRNFQANSRALEVHNGLQQNILQIR 434
           LVDLISAQRNFQANSR LEV+N LQQ +LQIR
Sbjct: 422 LVDLISAQRNFQANSRTLEVNNTLQQTVLQIR 453