Pairwise Alignments

Query, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., flagellar basal-body rod protein FlgF from Pseudomonas stutzeri RCH2

 Score =  234 bits (597), Expect = 1e-66
 Identities = 124/249 (49%), Positives = 168/249 (67%), Gaps = 3/249 (1%)

Query: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60
           MD+ L++AM+GA QN +A Q  ANNLAN+STTGFR D  QARSMQ +G+  P+RV++M+E
Sbjct: 1   MDKMLYVAMTGASQNARAQQAHANNLANISTTGFRRDFEQARSMQVFGDSHPARVYAMSE 60

Query: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120
           RP  +F  G++  TGRDLDI I+G+GWI+V    G E   R G+L ID  G+L   +G P
Sbjct: 61  RPATDFTSGTLQETGRDLDIAIEGEGWIAVQAPDGSEAYVRTGSLNIDVLGMLRTADGMP 120

Query: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180
           V+G  G PI +P P  K+++G DGTIS+R  G   + +  VDRIKLV  + + L K  +G
Sbjct: 121 VMG-NGGPIAIP-PEEKIDVGHDGTISIRALGENPNIVVTVDRIKLVNPDPKQLEKGTDG 178

Query: 181 LFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDK 240
           L R  D     E DA+V++++G LE SNVNA+ EMTS++ L RQFE+ VKMM TAE+   
Sbjct: 179 LIRLKD-GQPVEPDANVRVVSGFLEASNVNAVSEMTSILALSRQFELHVKMMRTAEDDAA 237

Query: 241 ASDSLLRSS 249
           A   +L+ S
Sbjct: 238 AMARVLQLS 246