Pairwise Alignments

Query, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., flagellar basal body rod protein FlgF (RefSeq) from Shewanella loihica PV-4

 Score =  293 bits (750), Expect = 2e-84
 Identities = 152/249 (61%), Positives = 189/249 (75%), Gaps = 2/249 (0%)

Query: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60
           MD+ L++AMSGAKQNM ++ +RANNLAN +T GF++DL QARSMQA+GEGLP+RVFSMTE
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKSDLEQARSMQAFGEGLPTRVFSMTE 60

Query: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120
            P  NFA G + TTGRDLDI ++GDGWI+V    G E  TR+G+L  D +GLL N  G+P
Sbjct: 61  NPSANFAAGPIKTTGRDLDIAVKGDGWIAVQAVDGGEAYTRSGSLSFDTSGLLRNDRGNP 120

Query: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180
           V+G+ G PI LP+P+ KVEI  DGTISVRP G+ A+ +E V RIKLV   +Q+L +  +G
Sbjct: 121 VMGDAG-PIVLPLPIEKVEIAQDGTISVRPLGSTAEVIEEVGRIKLVNPGNQNLMRGEDG 179

Query: 181 LFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDK 240
           LFR         AD +V + +GA+EGSNVNA+ EM SLIDLQRQFEMQVKMM TAEEMD+
Sbjct: 180 LFRQLS-GVNAPADPNVAVESGAIEGSNVNAVDEMVSLIDLQRQFEMQVKMMKTAEEMDQ 238

Query: 241 ASDSLLRSS 249
           AS SL+R S
Sbjct: 239 ASSSLMRIS 247