Pairwise Alignments

Query, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., flagellar basal-body rod protein FlgF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  279 bits (713), Expect = 4e-80
 Identities = 142/249 (57%), Positives = 183/249 (73%), Gaps = 2/249 (0%)

Query: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60
           MD+ L+++MSGAKQNM  + LRANNLAN +T GF++D+AQARSMQA+GEGLP+RVF+M E
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMVE 60

Query: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120
            P  NF  G + +TGRDLD+ I+GDGW +V  + G E  TR+G+L  D TGLL N  G+P
Sbjct: 61  TPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGNP 120

Query: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180
           V+G+ G PI LP+P+ KV I  DG ISVRPQGA  + +E V R+KLV   +  + +  +G
Sbjct: 121 VMGDAG-PIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDG 179

Query: 181 LFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDK 240
           LFR    +    AD SV + +GA+EGSNVN++ EM SLIDLQRQFE+QVKMM TAEE D+
Sbjct: 180 LFRLVSGDPA-PADPSVSVESGAVEGSNVNSVDEMVSLIDLQRQFELQVKMMKTAEENDR 238

Query: 241 ASDSLLRSS 249
           AS SL+R S
Sbjct: 239 ASSSLMRIS 247