Pairwise Alignments

Query, 262 a.a., flagellar basal-body rod protein FlgG from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., flagellar basal-body rod protein FlgG from Rahnella sp. WP5

 Score =  289 bits (739), Expect = 5e-83
 Identities = 141/260 (54%), Positives = 192/260 (73%), Gaps = 1/260 (0%)

Query: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60
           M P+L+++KTGLDAQQTN+  I+NNLAN ST GFK+ RAVFEDL YQ + QPGAQSS+ T
Sbjct: 1   MIPSLYIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTVRQPGAQSSEQT 60

Query: 61  RLPSGLMLGAGSKVVATQKVHTNGNVQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120
            LPSGL +G G + V+T+++ + GN+  TSNS D+ ++G+GFFQ+ +PDG  AY+R+G F
Sbjct: 61  NLPSGLQIGTGVRPVSTERLFSQGNLSQTSNSKDIAVKGEGFFQVQLPDGTTAYTRDGSF 120

Query: 121 TLDDEGAIVTSGAGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180
            +D  G +VTS +GY++ P I +P +A+S+T+G DG VSV  +GQ   Q +GQ+T   FI
Sbjct: 121 QVDQNGQLVTS-SGYQVIPAITVPANALSMTVGRDGIVSVTTQGQTAAQQVGQLTLSTFI 179

Query: 181 NPGGLEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRV 240
           N  GLE +G+NLY  T +SG P E  PGL+G G + Q  +ETSNVNV EELVNMI+ QR 
Sbjct: 180 NNSGLESLGENLYQETQSSGAPTESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQTQRA 239

Query: 241 YEMNSKVISAVDKMMSFVNQ 260
           YE+NSK +S  D+M+  ++Q
Sbjct: 240 YEINSKAVSTSDEMLQKLSQ 259