Pairwise Alignments

Query, 262 a.a., flagellar basal-body rod protein FlgG from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., flagellar basal-body rod protein FlgG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  371 bits (952), Expect = e-108
 Identities = 180/262 (68%), Positives = 217/262 (82%)

Query: 1   MQPALWVSKTGLDAQQTNIATISNNLANASTIGFKKGRAVFEDLFYQNINQPGAQSSQNT 60
           M PALW+SKTGLDAQQT+I+ ISNN+ANAST+G+KK RAVFEDL YQ +NQ G  S+ NT
Sbjct: 1   MHPALWISKTGLDAQQTDISVISNNVANASTVGYKKSRAVFEDLLYQTVNQAGGISASNT 60

Query: 61  RLPSGLMLGAGSKVVATQKVHTNGNVQTTSNSLDMMIEGDGFFQILMPDGNIAYSRNGQF 120
           +LP+GL +GAG+KVVATQK+ T GN+ TT NSLD+MIEG GFF+I +PDG  AY+RNGQF
Sbjct: 61  KLPNGLNIGAGTKVVATQKMFTQGNMLTTDNSLDLMIEGPGFFEIQLPDGTTAYTRNGQF 120

Query: 121 TLDDEGAIVTSGAGYRLQPEIIIPEDAISITIGNDGEVSVRVRGQQDNQVLGQITTVDFI 180
           TLDD G IVT G+GY LQP I IPEDA SIT+  +GEVSV+  G  +NQV+GQ++  DFI
Sbjct: 121 TLDDTGQIVTPGSGYVLQPPITIPEDATSITVSAEGEVSVKTPGAAENQVVGQLSMTDFI 180

Query: 181 NPGGLEPVGQNLYLPTGASGEPQEGVPGLDGLGDIRQSMLETSNVNVTEELVNMIEAQRV 240
           NP GL+P+GQNLY  TGASG P +G   LDG+G IRQ  LETSNVNVTEELVN+IE+QR+
Sbjct: 181 NPSGLDPMGQNLYTETGASGTPIQGTASLDGMGAIRQGALETSNVNVTEELVNLIESQRI 240

Query: 241 YEMNSKVISAVDKMMSFVNQQL 262
           YEMNSKVISAVD+M+++VNQ L
Sbjct: 241 YEMNSKVISAVDQMLAYVNQNL 262