Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., Flagellar basal body L-ring protein from Pseudomonas stutzeri RCH2

 Score =  173 bits (438), Expect = 3e-48
 Identities = 93/202 (46%), Positives = 127/202 (62%), Gaps = 7/202 (3%)

Query: 62  PVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAA 121
           P   DP +AP+ P+  P   A   G+++     +++YDD K   VGDIIT+TLNE T+A+
Sbjct: 24  PKPNDPYYAPVLPR-TPLPAAQNNGAIYQAGFETNLYDDRKAHRVGDIITITLNERTQAS 82

Query: 122 KSADADLNKKNDASMDPLAVGG------KDLTIGDYNFSYALKNDNKFSGSAAANQSNSM 175
           K+A + L+K + A++   ++ G        LT    N     +     SGS  A QSNS+
Sbjct: 83  KNATSKLSKDSSANIGLGSLFGGAVSMANPLTGNSMNLGAEYEASRDTSGSGQAGQSNSL 142

Query: 176 SGSITVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNAR 235
           SGSITV + EVL NG L +RGEKW+TLNTGDE +R++G +R DDI  DNT+ S RI++AR
Sbjct: 143 SGSITVTISEVLPNGILAVRGEKWMTLNTGDELVRIAGLVRADDISTDNTVPSTRIADAR 202

Query: 236 IQYSGTGTNQDMQEPGFLARFF 257
           I YSGTG   D  +PG+L RFF
Sbjct: 203 ITYSGTGAFADASQPGWLDRFF 224