Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., flagellar basal body L-ring protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  182 bits (463), Expect = 4e-51
 Identities = 93/196 (47%), Positives = 133/196 (67%), Gaps = 1/196 (0%)

Query: 62  PVAGDPAWAPIHPKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKAA 121
           P+  DP +AP+ P+ +P      TGS+F  + ++S+Y D +   VGDIITV L EST+A 
Sbjct: 23  PIPDDPYYAPVVPE-EPPVALEPTGSIFLDSQAASLYTDIRAHRVGDIITVVLTESTQAT 81

Query: 122 KSADADLNKKNDASMDPLAVGGKDLTIGDYNFSYALKNDNKFSGSAAANQSNSMSGSITV 181
           KSA+ ++ K +D +MD +   G  +TI     S    +       A A+QSNS+ G+I+ 
Sbjct: 82  KSANNEIKKGSDLNMDAIQALGGPVTISGNPLSLGYSDSMNTKREADADQSNSLRGNISA 141

Query: 182 EVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYSGT 241
            V++VLANGNLVIRGEKW+++N GDE+IR++G IRP DI  DNT+ S R++NARIQYSGT
Sbjct: 142 HVLQVLANGNLVIRGEKWISINNGDEFIRVTGVIRPQDITTDNTVVSTRVANARIQYSGT 201

Query: 242 GTNQDMQEPGFLARFF 257
           GT  + Q+ G+L++FF
Sbjct: 202 GTFANSQQVGWLSQFF 217