Pairwise Alignments

Query, 261 a.a., flagellar L-ring protein from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., flagellar basal body L-ring protein FlgH from Rhodopseudomonas palustris CGA009

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 9/202 (4%)

Query: 67  PAWAPIH-PKGKPEHYAAETGSLFNLASSSSMYDDSKPRGVGDIITVTLNESTKA--AKS 123
           P + P+  P  KPE  +    SL+    S + + D +   VGDI+TVT+N + KA  A  
Sbjct: 51  PGYKPVQMPMPKPEVASYNANSLWR-NGSRAFFKDQRAAKVGDILTVTVNFTDKANIANE 109

Query: 124 ADADLNKKNDASMDPLAVGGKDLTIGDYNF--SYALKNDNKFS--GSAAANQSNSMSGSI 179
                  K D+ +    +G K +T           L  D+  S  G  +  +  ++  ++
Sbjct: 110 TQRSRTSKEDSGITDF-IGSKTITTPATAVLPGRILTTDSTSSSDGKGSVQRQEALQTNV 168

Query: 180 TVEVIEVLANGNLVIRGEKWLTLNTGDEYIRLSGTIRPDDIDFDNTIASNRISNARIQYS 239
              V +VL NGNLV+ G++ + +N     + ++G +RP+DI  DNTI S++I+ ARI Y 
Sbjct: 169 AAVVTQVLPNGNLVVEGKQEIRVNFEIRELIVAGIVRPEDIQSDNTIDSSKIAQARIAYG 228

Query: 240 GTGTNQDMQEPGFLARFFNVSL 261
           G G   D+Q+P +  +  +V L
Sbjct: 229 GRGQITDVQQPRYGQQVMDVLL 250